RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SLC9B1Q4ZJI4 515 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 IL23RQ5VWK5 629 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 ATG16L1Q676U5 607 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 OR4F3Q6IEY1 312 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 FRRS1Q6ZNA5 592 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 ANKRD46Q86W74 232 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 C1QL4Q86Z23 238 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 GPR137CQ8N3F9 429 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 PRPF18Q99633 342 aaKnown RBP9.97□□□□□ -0.81
SDCBP-211ENST00000523441 DCDC2Q9UHG0 476 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 TMED5Q9Y3A6 229 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 DNAJC15Q9Y5T4 150 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 TMEM229AB2RXF0 380 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 H3BQF6 201 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 M0R3G1 203 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF208O43345 1280 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 GLRA3O75311 464 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 URI1O94763 535 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 CHRNGP07510 517 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 GKN3PP0CG01 181 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 CPA3P15088 417 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 NR4A1P22736 598 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 ARR3P36575 388 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 RAD52P43351 418 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 TMEM33P57088 247 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 GALK2Q01415 458 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 FUT5Q11128 374 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 TRMT5Q32P41 509 aaKnown RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 KANK2Q63ZY3 851 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 LEG1Q6P5S2 330 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 LCA5Q86VQ0 697 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 JAZF1Q86VZ6 243 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 EPHX4Q8IUS5 362 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 C10orf107Q8IVU9 208 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 BCL6BQ8N143 479 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 C17orf53Q8N3J3 647 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 FNDC5Q8NAU1 212 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 ICA1LQ8NDH6 482 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 PSMA8Q8TAA3 256 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 MGARPQ8TDB4 240 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 SF3B5Q9BWJ5 86 aaKnown RBP9.96□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF416Q9BWM5 594 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 NTN4Q9HB63 628 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 GPR35Q9HC97 309 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 UBAP1Q9NZ09 502 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 SEC14L4Q9UDX3 406 aa9.96□□□□□ -0.82
SDCBP-211ENST00000523441 ISPDA4D126 451 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 SMIM23A6NLE4 172 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 SLC43A1O75387 559 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 C1QCP02747 245 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 GSNP06396 782 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 CBLP22681 906 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 GTF2E2P29084 291 aaKnown RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 CHI3L1P36222 383 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 PTDSS1P48651 473 aaKnown RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 AQP5P55064 265 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 GLO1Q04760 184 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 HNRNPA0Q13151 305 aaKnown RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 C3orf36Q3SXR2 165 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 C1QTNF12Q5T7M4 302 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 SYT10Q6XYQ8 523 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 ANKFN1Q8N957 763 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 MAGEE2Q8TD90 523 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 RAB39BQ96DA2 213 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 PPP1R36Q96LQ0 422 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 CCT8L2Q96SF2 557 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 GATA5Q9BWX5 397 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-211ENST00000523441 DPY30Q9C005 99 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 TNFRSF19Q9NS68 423 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 MED29Q9NX70 200 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 CACNG2Q9Y698 323 aa9.95□□□□□ -0.82
SDCBP-211ENST00000523441 IGHV3OR16-10A0A075B7F0 116 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 CFAP73A6NFT4 308 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 FRS3O43559 492 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 PLIN3O60664 434 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 RP2O75695 350 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF432O94892 652 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 GPANK1O95872 356 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 CLPTM1O96005 669 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 FAM157BP0CG42 384 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 UQCRBP14927 111 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 IL7RP16871 459 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF43P17038 809 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 NCF2P19878 526 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 PRTN3P24158 256 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 RPS5P46782 204 aaKnown RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 SH3BGRP55822 239 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 DNAJB13P59910 316 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 C1DQ13901 141 aaKnown RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 CHI3L2Q15782 390 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 SYPL1Q16563 259 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 TSTQ16762 297 aaKnown RBP9.94□□□□□ -0.82
SDCBP-211ENST00000523441 ARMCX4Q5H9R4 360 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 PHYHD1Q5SRE7 291 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 REP15Q6BDI9 236 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 TMEM154Q6P9G4 183 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 WDFY1Q8IWB7 410 aa9.94□□□□□ -0.82
SDCBP-211ENST00000523441 ACMSDQ8TDX5 336 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms