RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RYBPQ8N488 228 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 SPATA22Q8NHS9 363 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 NOL4LQ96MY1 436 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 SNX18Q96RF0 628 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 TIMP4Q99727 224 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 SLC17A5Q9NRA2 495 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 IL17RBQ9NRM6 502 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 GPATCH2LQ9NWQ4 482 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 SLC17A6Q9P2U8 582 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 TFR2Q9UP52 801 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 CRYBG1Q9Y4K1 1723 aa6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 CHD2O14647 1828 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-206ENST00000508170 OR7A17O14581 309 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SLC16A5O15375 505 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 GLSO94925 669 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 HLA-DQA2P01906 255 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TCP1P17987 556 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 S100PP25815 95 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PRDX3P30048 256 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 NBL1P41271 181 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RPS15AP62244 130 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PAX2Q02962 417 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 MLLT11Q13015 90 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 GAGE1Q13065 139 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ITGA9Q13797 1035 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 GPR33Q49SQ1 333 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SYT14P1Q58G82 188 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 LINGO2Q7L985 606 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TMEM144Q7Z5S9 345 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TP53INP2Q8IXH6 220 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 CLDN19Q8N6F1 224 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 MRPL48Q96GC5 212 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 QKIQ96PU8 341 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ALG8Q9BVK2 526 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PRRG4Q9BZD6 226 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TMEM38AQ9H6F2 299 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 GAREM1Q9H706 876 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 EML4Q9HC35 981 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 VAPAQ9P0L0 249 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 NUP50Q9UKX7 468 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TRAV18A0A075B6X5 111 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TRBV9A0A0B4J1U6 114 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 A0A1W2PRF3 423 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 A0A1W2PRM7 423 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PSMB11A5LHX3 300 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 DUSP1P28562 367 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SSTR5P35346 364 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RRADP55042 308 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TFAMQ00059 246 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ST3GAL3Q11203 375 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 VGLL4Q14135 290 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PTGR1Q14914 329 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PTGES3Q15185 160 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RPEL1Q2QD12 228 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 PDZD11Q5EBL8 140 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TMEM268Q5VZI3 342 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RPL13AP3Q6NVV1 102 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ENPP6Q6UWR7 440 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 CTU1Q7Z7A3 348 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 JAGN1Q8N5M9 183 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 POM121L2Q96KW2 1035 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 NEURL2Q9BR09 285 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 ELOVL4Q9GZR5 314 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 OR51M1Q9H341 326 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RRAGCQ9HB90 399 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 BEX1Q9HBH7 125 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 NMRAL1Q9HBL8 299 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TXNRD2Q9NNW7 524 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 FGFR1OP2Q9NVK5 253 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 SDHAF2Q9NX18 166 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RAB26Q9ULW5 256 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 TMED3Q9Y3Q3 217 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 RGPD2P0DJD1 1756 aa6.73□□□□□ -1.33
PDGFRA-206ENST00000508170 OVOS2A0A0G2JMS6 1433 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 PRSS51A0A1B0GVH4 220 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 HIDE1A8MVS5 230 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 BLOC1S5-TXNDC5H3BN57 136 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 FZD7O75084 574 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 DIRAS1O95057 198 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ABCB11O95342 1321 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CNIH1O95406 144 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CYB5R3P00387 301 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ORM1P02763 201 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CT45A8P0DMV1 189 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CT45A9P0DMV2 189 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 HAPLN1P10915 354 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 NDUFB7P17568 137 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 HMGB2P26583 209 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 HLCSP50747 726 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 DAP3P51398 398 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 ZXDAP98168 799 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 DGUOKQ16854 277 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 TMEM176BQ3YBM2 270 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 CT45A2Q5DJT8 189 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 C1orf220Q5T0J3 134 aa6.72□□□□□ -1.33
PDGFRA-206ENST00000508170 FAM199XQ6PEV8 388 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms