RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 RPS4XP62701 263 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 GUCY1A3Q02108 690 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 DMTNQ08495 405 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 OR1Q1Q15612 314 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF672Q499Z4 452 aaPredicted RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 C9orf135Q5VTT2 229 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 REP15Q6BDI9 236 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 NIPAL3Q6P499 406 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 KLHL24Q6TFL4 600 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 CREB3L2Q70SY1 520 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 YTHDF3Q7Z739 585 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC26A7Q8TE54 656 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 KTI12Q96EK9 354 aaPredicted RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 MUS81Q96NY9 551 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ALKBH3Q96Q83 286 aaPredicted RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 RSPO3Q9BXY4 272 aaPredicted RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 AMBRA1Q9C0C7 1298 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ALG2Q9H553 416 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 CCDC134Q9H6E4 229 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 KLHL14Q9P2G3 628 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ADAM21Q9UKJ8 722 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 LAMP3Q9UQV4 416 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 B3GALT5Q9Y2C3 310 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC25A15Q9Y619 301 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 A0A087WUJ7 227 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 FAM171A2A8MVW0 826 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 M0QX08 132 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 M0R082 166 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 M0R3H8 397 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 FBP2O00757 339 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 FMO6PO60774 539 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 FZD7O75084 574 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 LGI1O95970 557 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 NPPAP01160 153 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 PAX1P15863 534 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 GRPRP30550 384 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 SELENOPP49908 381 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF83P51522 516 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 CDH11P55287 796 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 FOXG1P55316 489 aaPredicted RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 IL1RL1Q01638 556 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 KLF10Q13118 480 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 DUSP7Q16829 419 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 VMACQ2NL98 169 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 NANOGP8Q6NSW7 305 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 CGB2Q6NT52 195 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF613Q6PF04 617 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ZIC4Q8N9L1 334 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 PCYOX1LQ8NBM8 494 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ADPRHL1Q8NDY3 354 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 OR8J3Q8NGG0 315 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 LILRB1Q8NHL6 650 aaPredicted RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF417Q8TAU3 575 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 SMAP2Q8WU79 429 aaPredicted RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 IGFBPL1Q8WX77 278 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 GTPBP3Q969Y2 492 aaKnown RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 LRRC58Q96CX6 371 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 COX4I2Q96KJ9 171 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 Q96MF0 132 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF587Q96SQ5 575 aaPredicted RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 MCHR1Q99705 422 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ARHGDIGQ99819 225 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 ECSITQ9BQ95 431 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 NANOGQ9H9S0 305 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 SAR1AQ9NR31 198 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC17A5Q9NRA2 495 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 CISD1Q9NZ45 108 aaKnown RBP10□□□□□ -0.81
NUDCD3-206ENST00000475952 POU2F3Q9UKI9 436 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 RCE1Q9Y256 329 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 CORINQ9Y5Q5 1042 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 CAPN7Q9Y6W3 813 aa10□□□□□ -0.81
NUDCD3-206ENST00000475952 IGKV1D-42A0A075B6H8 117 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 A0A1W2PR80 420 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 M0R1B8 84 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 MRASO14807 208 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC22A2O15244 555 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CHP2O43745 196 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 WNT11O96014 354 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 DANCRP0C864 163 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CDH2P19022 906 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 PAX7P23759 505 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CD40P25942 277 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CDH12P55289 794 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 ATP5J2P56134 94 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CLDN17P56750 224 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SF3A3Q12874 501 aaKnown RBP eCLIP9.99□□□□□ -0.814e-6■■■□□ 19.1
NUDCD3-206ENST00000475952 C1DQ13901 141 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 NRF1Q16656 503 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 ERICH5Q6P6B1 374 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC22A25Q6T423 547 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SNX32Q86XE0 403 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 EPHX4Q8IUS5 362 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 CIARTQ8N365 385 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 KDM8Q8N371 416 aa9.99□□□□□ -0.81
NUDCD3-206ENST00000475952 SCAIQ8N9R8 606 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms