RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 FOXL2P58012 376 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 TAS2R43P59537 309 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 ACTC1P68032 377 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 ACTA1P68133 377 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 FUT7Q11130 342 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 POU4F2Q12837 409 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 NDUFAF6Q330K2 333 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 NKAIN1Q4KMZ8 207 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 METAP1DQ6UB28 335 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-202ENST00000374876 TMEM151BQ8IW70 566 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 FAM98AQ8NCA5 519 aaKnown RBP14.16□□□□□ -0.14
CCDC40-202ENST00000374876 OR52E2Q8NGJ4 325 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 OR5M3Q8NGP4 307 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 OR51Q1Q8NH59 317 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 SGTBQ96EQ0 304 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 RNF32Q9H0A6 362 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 HAO2Q9NYQ3 351 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 FBXL4Q9UKA2 621 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 ADAM30Q9UKF2 790 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 CLDN16Q9Y5I7 305 aa14.16□□□□□ -0.14
CCDC40-202ENST00000374876 J3QLW9 94 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 SLC2A2P11168 524 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF19P17023 458 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 CD53P19397 219 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 RPS18P62269 152 aaKnown RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 TLE3Q04726 772 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 FHL1Q13642 323 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 TRAM1Q15629 374 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 YOD1Q5VVQ6 348 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 OR4C3Q8NH37 302 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 C4orf36Q96KX1 117 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 CCNL2Q96S94 520 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 MARCH7Q9H992 704 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 MALT1Q9UDY8 824 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 A0A087WV48 116 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 TTC36A6NLP5 189 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 DVL2O14641 736 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 SEC14L5O43304 696 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 APEX1P27695 318 aaKnown RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 HTR3AP46098 478 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 CAPZA2P47755 286 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 EVX1P49640 407 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF85Q03923 595 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 SLC3A1Q07837 685 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 IL18Q14116 193 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 SERTAD2Q14140 314 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 KCNJ8Q15842 424 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 TRIQKQ629K1 86 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 Q8N402 240 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF615Q8N8J6 731 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 OR4K13Q8NH42 304 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 SMAP2Q8WU79 429 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ACOT12Q8WYK0 555 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 PELOQ9BRX2 385 aaKnown RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 C11orf54Q9H0W9 315 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF304Q9HCX3 659 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 PRODH2Q9UF12 536 aa14.15□□□□□ -0.14
CCDC40-202ENST00000374876 ZZEF1O43149 2961 aa14.15□□□□□ -0.15
CCDC40-202ENST00000374876 E9PI62 339 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 TERTO14746 1132 aaKnown RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 TFECO14948 347 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 PLPP2O43688 288 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 SLC19A2O60779 497 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 PPM1BO75688 479 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 HIST1H1CP16403 213 aaKnown RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 RPL4P36578 427 aaKnown RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 RSBN1Q5VWQ0 802 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 FAAH2Q6GMR7 532 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 FAM198BQ6UWH4 519 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 VASH1Q7L8A9 365 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 C19orf18Q8NEA5 215 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 SDR9C7Q8NEX9 313 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 SOSTQ9BQB4 213 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 YIPF2Q9BWQ6 316 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 PPP1R3EQ9H7J1 279 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 CHRNA9Q9UGM1 479 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 KLHL21Q9UJP4 597 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 A0A087WUJ7 227 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 H0YIG0 161 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 KRT8P05787 483 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 PTBP1P26599 531 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 OR12D2P58182 307 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 IDNKQ5T6J7 187 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 NCCRP1Q6ZVX7 275 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 COX15Q7KZN9 410 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 LRRC17Q8N6Y2 441 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 ITFG2Q969R8 447 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 EFHD2Q96C19 240 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 SENP5Q96HI0 755 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 MMP28Q9H239 520 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 FARSAQ9Y285 508 aaKnown RBP14.14□□□□□ -0.15
CCDC40-202ENST00000374876 IER3IP1Q9Y5U9 82 aa14.14□□□□□ -0.15
CCDC40-202ENST00000374876 C17orf105B2RV13 164 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 FAM25AB3EWG3 89 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 FAM25CB3EWG5 89 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 FAM25GB3EWG6 89 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 MCIDASD6RGH6 385 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms