RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OR10Z1Q8NGY1 313 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 INTS12Q96CB8 462 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 PRRC1Q96M27 445 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF701M0R085 212 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 CYTIPO60759 359 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 KCNK2O95069 426 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 AIFM1O95831 613 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 AGR2O95994 175 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SERPINF1P36955 418 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 EMP2P54851 167 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 HSD11B2P80365 405 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 MLLT11Q13015 90 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 NKAIN4Q8IVV8 208 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 PELI3Q8N2H9 469 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 MED30Q96HR3 178 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC6A13Q9NSD5 602 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NQO2P16083 231 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CPT2P23786 658 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC1A3P43003 542 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 LHX3Q9UBR4 397 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 WASF3Q9UPY6 502 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CNMDO75829 334 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TIMP2P16035 220 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 DLX5P56178 289 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SNRPNP63162 240 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 DEFB126Q9BYW3 111 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NRSN2Q9GZP1 204 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NIPAL2Q9H841 368 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ATG4BQ9Y4P1 393 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CSAG2Q9Y5P2 127 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 DYSFO75923 2080 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 QDPRP09417 244 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 FCGR2AP12318 317 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NKAIN2Q5VXU1 208 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SGPP2Q8IWX5 399 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 GPR137CQ8N3F9 429 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ADAMTS14Q8WXS8 1223 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC2A11Q9BYW1 496 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 HOXD1Q9GZZ0 328 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TSPAN10Q9H1Z9 355 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 A0A1B0GUL6 1792 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ANTXRLA6NF34 631 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CSF1P09603 554 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CDK2P24941 298 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 AANATQ16613 207 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 SBSNQ6UWP8 590 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 TMEM182Q6ZP80 229 aaPredicted RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 PIGCQ92535 297 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ATP13A2Q9NQ11 1180 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 SDCBPO00560 298 aaPredicted RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 PIGTQ969N2 578 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 MVB12BQ9H7P6 319 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 DNAJB5O75953 348 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ALX3O95076 343 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CCL5P13501 91 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ZNF84P51523 738 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 OR51D1Q8NGF3 324 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MYO18BQ8IUG5 2567 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CLDN24A6NM45 220 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 B4DXG7 233 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 GABARAPO95166 117 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 GPR143P51810 404 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 Q7L0L9 218 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 PARS2Q7L3T8 475 aaKnown RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 KIAA0907Q7Z7F0 614 aaPredicted RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 HCAR2Q8TDS4 363 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 WFIKKN2Q8TEU8 576 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MOAP1Q96BY2 351 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MS4A4EQ96PG1 132 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MUTYHQ9UIF7 546 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ROS1P08922 2347 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 RICTORQ6R327 1708 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MEX3AA1L020 520 aaKnown RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 ZFP92A6NM28 416 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 GPR18Q14330 331 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 HSF5Q4G112 596 aaPredicted RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 ACTBL2Q562R1 376 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 SAMD14Q8IZD0 417 aaPredicted RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 ARRDC2Q8TBH0 407 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 DIO2Q92813 273 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 KATNB1Q9BVA0 655 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ALOXE3Q9BYJ1 711 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.98□□□□□ -1.29
RIF1-201ENST00000243326 ASH2LQ9UBL3 628 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 DIRAS3O95661 229 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 FGF4P08620 206 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 TPT1P13693 172 aaKnown RBP6.98□□□□□ -1.29
RIF1-201ENST00000243326 ADRA1AP35348 466 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 MEP1BQ16820 701 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 SAXO2Q658L1 398 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 ZNF425Q6IV72 752 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 USP51Q70EK9 711 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 PM20D2Q8IYS1 436 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CHFRQ96EP1 664 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 CREBZFQ9NS37 354 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
RIF1-201ENST00000243326 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms