RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TMEM45AQ9NWC5 275 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 SEC14L4Q9UDX3 406 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 GPR45Q9Y5Y3 372 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 SH3PXD2BA1X283 911 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 LRP5LA4QPB2 252 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CDHR4A6H8M9 788 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 A8MVM7 634 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 VWC2LB2RUY7 222 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF587BE7ETH6 402 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 FAAHO00519 579 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 TM9SF1O15321 606 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SEC14L2O76054 403 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ANP32DO95626 131 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 KRT75O95678 551 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CRYAAP02489 173 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CELA3BP08861 270 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CSF3P09919 207 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 NUDT7P0C024 238 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 OR4A8P0C604 315 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 APEHP13798 732 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SRD5A1P18405 259 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CBLP22681 906 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CALCRP30988 508 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 NR4A2P43354 598 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 RPS5P46782 204 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 GZMKP49863 264 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 P2RY4P51582 365 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 MVDP53602 400 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CLDN17P56750 224 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 COPZ1P61923 177 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SNRPD2P62316 118 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 GSTA3Q16772 222 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 LIN52Q52LA3 116 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CEP85LQ5SZL2 805 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 FAM120AOSQ5T036 256 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 HHATQ5VTY9 493 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 C1orf140Q5VVS0 124 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 WBP2NLQ6ICG8 309 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 OGFOD2Q6N063 350 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ANKRD16Q6P6B7 361 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CREB3L2Q70SY1 520 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SERPINA11Q86U17 422 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 MYPOPQ86VE0 399 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZCCHC24Q8N2G6 241 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC38A5Q8WUX1 472 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 BCL2L2Q92843 193 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 MSI2Q96DH6 328 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC38A2Q96QD8 506 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 PIMREGQ9BSJ6 248 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SOX7Q9BT81 388 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 SF3B5Q9BWJ5 86 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 P2RX2Q9UBL9 471 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 HAO1Q9UJM8 370 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 KCNS2Q9ULS6 477 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF443Q9Y2A4 671 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 CHST2Q9Y4C5 530 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 FKBP7Q9Y680 259 aa7.49□□□□□ -1.21
CTDNEP1-203ENST00000570385 AHSA1O95433 338 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 TGFAP01135 160 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 TFPTP0C1Z6 253 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 CECR9P0C854 216 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 PNMTP11086 282 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 IDH3GP51553 393 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 MAP2K6P52564 334 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 CRISP3P54108 245 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 DSTNP60981 165 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 ARF1P84077 181 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 IL1RL1Q01638 556 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 NAAAQ02083 359 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 NPRL3Q12980 569 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 LARS2Q15031 903 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 ADIPOQQ15848 244 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC9B1Q4ZJI4 515 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 FAM166AQ6J272 317 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 ABHD12BQ7Z5M8 362 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 SVOPLQ8N434 492 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 OR9I1Q8NGQ6 314 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 MAL2Q969L2 176 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 VPS33AQ96AX1 596 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 KTI12Q96EK9 354 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 TMEM19Q96HH6 336 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 C19orf24Q9BVV8 132 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 PARD6BQ9BYG5 372 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 BPESC1Q9GZL8 116 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 NELFAQ9H3P2 528 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 TPT1P8Q9HAU6 139 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 TMEM160Q9NX00 188 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 LPAR3Q9UBY5 353 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
CTDNEP1-203ENST00000570385 LOC390937A0A1W2PQ73 354 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZNF503-AS2A6NEH8 195 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 B9A039 149 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 LYNX1G3V0Z9 82 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 hCG_2039718K7EN88 272 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 HDAC3O15379 428 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 NPIPB7O75200 414 aa7.47□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC22A3O75751 556 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms