RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 INSL4Q14641 139 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SLC36A2Q495M3 483 aa10□□□□□ -0.81
CLK3-226ENST00000569406 BCDIN3DQ7Z5W3 292 aaKnown RBP10□□□□□ -0.81
CLK3-226ENST00000569406 PROKR2Q8NFJ6 384 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR10G2Q8NGC3 310 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR52B6Q8NGF0 335 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR52B4Q8NGK2 314 aa10□□□□□ -0.81
CLK3-226ENST00000569406 MVB12AQ96EY5 273 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ELF4Q99607 663 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 GABARAPL3Q9BY60 117 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SLC26A1Q9H2B4 701 aa10□□□□□ -0.81
CLK3-226ENST00000569406 FN3KRPQ9HA64 309 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
CLK3-226ENST00000569406 IL17CQ9P0M4 197 aa10□□□□□ -0.81
CLK3-226ENST00000569406 CCL27Q9Y4X3 112 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SEC14L6B5MCN3 397 aa10□□□□□ -0.81
CLK3-226ENST00000569406 M0QZK8 103 aa10□□□□□ -0.81
CLK3-226ENST00000569406 CTNSO60931 367 aa10□□□□□ -0.81
CLK3-226ENST00000569406 LINC00271P0C7V0 271 aa10□□□□□ -0.81
CLK3-226ENST00000569406 TYRP14679 529 aa10□□□□□ -0.81
CLK3-226ENST00000569406 CPN1P15169 458 aa10□□□□□ -0.81
CLK3-226ENST00000569406 MGMTP16455 207 aa10□□□□□ -0.81
CLK3-226ENST00000569406 IDSP22304 550 aa10□□□□□ -0.81
CLK3-226ENST00000569406 NDUFS1P28331 727 aa10□□□□□ -0.81
CLK3-226ENST00000569406 IL2RGP31785 369 aa10□□□□□ -0.81
CLK3-226ENST00000569406 MNDAP41218 407 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR3A1P47881 315 aa10□□□□□ -0.81
CLK3-226ENST00000569406 FABP5Q01469 135 aa10□□□□□ -0.81
CLK3-226ENST00000569406 NOGQ13253 232 aa10□□□□□ -0.81
CLK3-226ENST00000569406 MRPL49Q13405 166 aaKnown RBP10□□□□□ -0.81
CLK3-226ENST00000569406 HNF4GQ14541 408 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ZXDCQ2QGD7 858 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 OR2G6Q5TZ20 316 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ULK3Q6PHR2 472 aa10□□□□□ -0.81
CLK3-226ENST00000569406 PPP1R3BQ86XI6 285 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR10AD1Q8NGE0 317 aa10□□□□□ -0.81
CLK3-226ENST00000569406 LKAAEAR1Q8TD35 194 aa10□□□□□ -0.81
CLK3-226ENST00000569406 TNFRSF14Q92956 283 aa10□□□□□ -0.81
CLK3-226ENST00000569406 PLD4Q96BZ4 506 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ZNF689Q96CS4 500 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 DTD2Q96FN9 168 aa10□□□□□ -0.81
CLK3-226ENST00000569406 LMLNQ96KR4 655 aa10□□□□□ -0.81
CLK3-226ENST00000569406 LMF1Q96S06 567 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ADAM19Q9H013 955 aa10□□□□□ -0.81
CLK3-226ENST00000569406 POT1Q9NUX5 634 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ZIM2Q9NZV7 527 aa10□□□□□ -0.81
CLK3-226ENST00000569406 A0A087WZY1 265 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SURF4O15260 269 aa10□□□□□ -0.81
CLK3-226ENST00000569406 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
CLK3-226ENST00000569406 SLC26A5P58743 744 aa10□□□□□ -0.81
CLK3-226ENST00000569406 RNF219Q5W0B1 726 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 OGFOD3Q6PK18 319 aa10□□□□□ -0.81
CLK3-226ENST00000569406 SBSNQ6UWP8 590 aa10□□□□□ -0.81
CLK3-226ENST00000569406 Q6ZSR9 355 aa10□□□□□ -0.81
CLK3-226ENST00000569406 C5orf24Q7Z6I8 188 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ZNF546Q86UE3 836 aa10□□□□□ -0.81
CLK3-226ENST00000569406 C10orf111Q8N326 155 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR56B1Q8NGI3 324 aa10□□□□□ -0.81
CLK3-226ENST00000569406 TERB2Q8NHR7 220 aa10□□□□□ -0.81
CLK3-226ENST00000569406 FCRL4Q96PJ5 515 aa10□□□□□ -0.81
CLK3-226ENST00000569406 ALKBH3Q96Q83 286 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
CLK3-226ENST00000569406 OR52A5Q9H2C5 316 aa10□□□□□ -0.81
CLK3-226ENST00000569406 TRPV4Q9HBA0 871 aa10□□□□□ -0.81
CLK3-226ENST00000569406 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 ZNF282Q9UDV7 671 aaPredicted RBP10□□□□□ -0.81
CLK3-226ENST00000569406 LSM2Q9Y333 95 aaKnown RBP10□□□□□ -0.81
CLK3-226ENST00000569406 GON4LQ3T8J9 2241 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 OR5H15A6NDH6 313 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 OR5H1A6NKK0 313 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 UPK3BL1B0FP48 263 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 UPK3BL2E5RIL1 263 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 E7EQ34 232 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TNFRSF11BO00300 401 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 GOSR2O14653 212 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 SFTA3P0C7M3 94 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 METTL15P1P0C7V9 234 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 RBM34P42696 430 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 MECP2P51608 486 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 MESTQ5EB52 335 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 UBE2R2Q712K3 238 aaPredicted RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 HIST2H3AQ71DI3 136 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 C19orf47Q8N9M1 422 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 HSH2DQ96JZ2 352 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 PTCHD1Q96NR3 888 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 S100A13Q99584 98 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 OPN4Q9UHM6 478 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 FBXL4Q9UKA2 621 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 DNAJB6O75190 326 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 RLN1P04808 185 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 BCHEP06276 602 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 LAG3P18627 525 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CNR2P34972 360 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 HTR6P50406 440 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CDH11P55287 796 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 VEZF1Q14119 521 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 VMACQ2NL98 169 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms