RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IL1RL1Q01638 556 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 C1DQ13901 141 aaKnown RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 TMEM249Q2WGJ8 235 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 B3GLCTQ6Y288 498 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 KRT73Q86Y46 540 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 GOLGA6L1Q8N7Z2 621 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ELOA3Q8NG57 546 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 OR10H5Q8NGA6 315 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 FBXO17Q96EF6 278 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 MAELQ96JY0 434 aaKnown RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF385AQ96PM9 386 aaKnown RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 PIMREGQ9BSJ6 248 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 SPATA5L1Q9BVQ7 753 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 MYOZ1Q9NP98 299 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 LPAR3Q9UBY5 353 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 SLC13A4Q9UKG4 626 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 KLF11O14901 512 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 OR2T1O43869 369 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 ACAA2P42765 397 aaKnown RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 PDLIM4P50479 330 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 VLDLRP98155 873 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 BNIP2Q12982 314 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 HIKESHIQ53FT3 197 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 RPS26P11Q5JNZ5 115 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 CYB5R2Q6BCY4 276 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF525Q8N782 197 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 OR1K1Q8NGR3 316 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 MFSD8Q8NHS3 518 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 C3orf49Q96BT1 292 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 ZBTB9Q96C00 473 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 SLC25A36Q96CQ1 311 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 ALKBH3Q96Q83 286 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-211ENST00000539843 SLC38A2Q96QD8 506 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 KCNK17Q96T54 332 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 KATNB1Q9BVA0 655 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 RCE1Q9Y256 329 aa13.38□□□□□ -0.27
UBE3B-211ENST00000539843 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 NDUFS8O00217 210 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 CLIC1O00299 241 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 AIM2O14862 343 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 SLC43A1O75387 559 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 LGI1O95970 557 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 C1QCP02747 245 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
UBE3B-211ENST00000539843 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-211ENST00000539843 SELENOPP49908 381 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 MAGOHP61326 146 aaKnown RBP13.37□□□□□ -0.27
UBE3B-211ENST00000539843 SLC9B1Q4ZJI4 515 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 ANKRD16Q6P6B7 361 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 CREB3L2Q70SY1 520 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 SERPINA11Q86U17 422 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 GPR137CQ8N3F9 429 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF540Q8NDQ6 660 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 HTRA1Q92743 480 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 SLC38A4Q969I6 547 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 BOD1Q96IK1 185 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 C12orf10Q9HB07 376 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 BCL2L10Q9HD36 194 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 A4GALTQ9NPC4 353 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 CORO2BQ9UQ03 480 aa13.37□□□□□ -0.27
UBE3B-211ENST00000539843 CHD3Q12873 2000 aaKnown RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 ARPC4-TTLL3A0A0A6YYG9 625 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 B9A039 149 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF500O60304 480 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 PDE5AO76074 875 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 F12P00748 615 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 PNMTP11086 282 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 SERPINF1P36955 418 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 RPS5P46782 204 aaKnown RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 GZMKP49863 264 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 MVDP53602 400 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 CLDN17P56750 224 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 MFSD13AQ14CX5 517 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 RGNQ15493 299 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 CARTPTQ16568 116 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 CLIP4Q8N3C7 705 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 ZIC4Q8N9L1 334 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 ANKK1Q8NFD2 765 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 BHLHE22Q8NFJ8 381 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 MAGEE2Q8TD90 523 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-211ENST00000539843 VPS33AQ96AX1 596 aa13.36□□□□□ -0.27
UBE3B-211ENST00000539843 EPYCQ99645 322 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms