RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 FAM57BQ71RH2 274 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 MED25Q71SY5 747 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 RPS19BP1Q86WX3 136 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 C7orf50Q9BRJ6 194 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ZDHHC5Q9C0B5 715 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 CALHM2Q9HA72 323 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 FBXO7Q9Y3I1 522 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 GPR137BO60478 399 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC22A5O76082 557 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 HEXAP06865 529 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 NPPBP16860 134 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 SIRPAP78324 504 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 TSNAXQ99598 290 aaKnown RBP13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ATG4BQ9Y4P1 393 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 UBR3Q6ZT12 1888 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 SYT5O00445 386 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 GAAP10253 952 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 CATR1Q13166 79 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 MARCH3Q86UD3 253 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 NDNFQ8TB73 568 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ANKRD19PQ9H560 264 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 LSM5Q9Y4Y9 91 aaKnown RBP13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 MYO10Q9HD67 2058 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 TARM1B6A8C7 271 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 LILRB5O75023 590 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 SEC14L2O76054 403 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 PTTG1O95997 202 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 FURINP09958 794 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 NFATC3Q12968 1075 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 MFAP5Q13361 173 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 PHC2Q8IXK0 858 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 CXorf36Q9H7Y0 433 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ACP2P11117 423 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 STT3AP46977 705 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 CCR5P51681 352 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 METRNLQ641Q3 311 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ASCC1Q8N9N2 400 aaKnown RBP13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF286AQ9HBT8 521 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 OR14J1Q9UGF5 321 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 ABHD16AO95870 558 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 CAPNS1P04632 268 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 AFMIDQ63HM1 303 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 Q6ZPB1 254 aaPredicted RBP13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 HYLS1Q96M11 299 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 GLIPR2Q9H4G4 154 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
PCDHA9-202ENST00000532602 AP1G1O43747 822 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 NKAIN1Q4KMZ8 207 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ABHD17CQ6PCB6 329 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SYNPRQ8TBG9 265 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 KATNB1Q9BVA0 655 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 LYRM4Q9HD34 91 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 LAMB2P55268 1798 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 FCGR2AP12318 317 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SERPINA2P20848 420 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 F2RL1P55085 397 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC48A1Q6P1K1 146 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 TIMM8BQ9Y5J9 83 aaPredicted RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 PRAMEF25A6NGN4 478 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SHISA7A6NL88 538 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 CDK1P06493 297 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 MSR1P21757 451 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 DRD5P21918 477 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ARNTP27540 789 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 LIM2P55344 173 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 S100A12P80511 92 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ELAVL1Q15717 326 aaKnown RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 CLVS2Q5SYC1 327 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 NT5DC2Q9H857 520 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 STEAP1Q9UHE8 339 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ETV6P41212 452 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF92Q03936 586 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 P2RY14Q15391 338 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 CNIH2Q6PI25 160 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 MEX3BQ6ZN04 569 aaKnown RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 PDZD9Q8IXQ8 264 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SIRT6Q8N6T7 355 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 CDHR4A6H8M9 788 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 AGAP7PQ5VUJ5 663 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC43A2Q8N370 569 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 S100PBPQ96BU1 408 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 CPPED1Q9BRF8 314 aaPredicted RBP13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF649Q9BS31 505 aa13.68□□□□□ -0.22
PCDHA9-202ENST00000532602 PRKAR1BP31321 381 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms