RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	SLC9B1	Q4ZJI4	515 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	NIPAL3	Q6P499	406 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	SERPINA11	Q86U17	422 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	ZIC4	Q8N9L1	334 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	ELOA3	Q8NG57	546 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	STK35	Q8TDR2	534 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	HTRA1	Q92743	480 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC35B4	Q969S0	331 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	FBXO17	Q96EF6	278 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC38A2	Q96QD8	506 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	REPIN1	Q9BWE0	567 aa	Known RBP	13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC6A13	Q9NSD5	602 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	CDC42EP3	Q9UKI2	254 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	MOK	Q9UQ07	419 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	KLF11	O14901	512 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	AKAP8	O43823	692 aa	Known RBP	13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	ERLIN1	O75477	346 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	LGI1	O95970	557 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	PRG2	P13727	222 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	SELENOP	P49908	381 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	MAGOH	P61326	146 aa	Known RBP	13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	VLDLR	P98155	873 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	GTDC1	Q4AE62	458 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	C5orf46	Q6UWT4	87 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	CREB3L2	Q70SY1	520 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	CLIP4	Q8N3C7	705 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	GOLGA6L1	Q8N7Z2	621 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	OR1K1	Q8NGR3	316 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	MFSD8	Q8NHS3	518 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	PROX1	Q92786	737 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	VPS33A	Q96AX1	596 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	C3orf49	Q96BT1	292 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC25A36	Q96CQ1	311 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	BOD1	Q96IK1	185 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	KATNB1	Q9BVA0	655 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	A4GALT	Q9NPC4	353 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	RCE1	Q9Y256	329 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	USF3	Q68DE3	2245 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	ROS1	P08922	2347 aa		13.69	□□□□□ -0.22
CDK16-222	ENST00000523699	RNF212B	A8MTL3	300 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	TMEM229A	B2RXF0	380 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	POLR3G	O15318	223 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	GPRIN2	O60269	458 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	ZNF500	O60304	480 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	ZNF43	P17038	809 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	NCALD	P61601	193 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	C1D	Q13901	141 aa	Known RBP	13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	RGN	Q15493	299 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC46A3	Q7Z3Q1	461 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	KRT73	Q86Y46	540 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	OR9I1	Q8NGQ6	314 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	C10orf105	Q8TEF2	133 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	OR52B2	Q96RD2	323 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	KCNK17	Q96T54	332 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	PIMREG	Q9BSJ6	248 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	BCL2L10	Q9HD36	194 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	SELENON	Q9NZV5	590 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	LPAR3	Q9UBY5	353 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	FBXO9	Q9UK97	447 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	TLN2	Q9Y4G6	2542 aa		13.68	□□□□□ -0.22
CDK16-222	ENST00000523699	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	IGHV1-18	A0A0C4DH31	117 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	NDUFS8	O00217	210 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	CLIC1	O00299	241 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	AIM2	O14862	343 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	OR2T1	O43869	369 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	NPIPB7	O75200	414 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC43A1	O75387	559 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	F12	P00748	615 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	FAM157C	P0CG43	387 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	PNMT	P11086	282 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	USF1	P22415	310 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	RPS5	P46782	204 aa	Known RBP	13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	PDLIM4	P50479	330 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	IL1RL1	Q01638	556 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	CYB5R2	Q6BCY4	276 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	ANKRD16	Q6P6B7	361 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	MAVS	Q7Z434	540 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	GPR137C	Q8N3F9	429 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC38A4	Q969I6	547 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	SPATA5L1	Q9BVQ7	753 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	LINC00470	Q9BZP3	86 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	C12orf10	Q9HB07	376 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	CA10	Q9NS85	328 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	SLC13A4	Q9UKG4	626 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699	USH1C	Q9Y6N9	552 aa		13.67	□□□□□ -0.22
CDK16-222	ENST00000523699		A0A096LNT2	108 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	VSTM5	A8MXK1	200 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	PDE5A	O76074	875 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	ERCC1	P07992	297 aa	Predicted RBP	13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	HOXB1	P14653	301 aa	Predicted RBP	13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	ETS2	P15036	469 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	ZNF16	P17020	682 aa	Predicted RBP	13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	PPIB	P23284	216 aa	Known RBP	13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	PRKAR1B	P31321	381 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	SERPINF1	P36955	418 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	GZMK	P49863	264 aa		13.66	□□□□□ -0.22
CDK16-222	ENST00000523699	P2RY4	P51582	365 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms