RNA–Protein interactions for RNA: ENST00000487550.5

MED15-228, Transcript of mediator complex subunit 15, humanhuman

TSL 3

Gene MED15, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-228ENST00000487550 HNRNPCL3B7ZW38 293 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 ZNF587BE7ETH6 402 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 HNRNPCL1O60812 293 aaKnown RBP13.55□□□□□ -0.24
MED15-228ENST00000487550 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 ZCCHC18P0CG32 403 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 FAM157CP0CG43 387 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 HNRNPCL4P0DMR1 293 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
MED15-228ENST00000487550 ACAA2P42765 397 aaKnown RBP13.55□□□□□ -0.24
MED15-228ENST00000487550 UBE2NP61088 152 aaKnown RBP13.55□□□□□ -0.24
MED15-228ENST00000487550 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 SLC38A5Q8WUX1 472 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 FBXO17Q96EF6 278 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 ITCHQ96J02 903 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 SLCO1B3Q9NPD5 702 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 RASD1Q9Y272 281 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 FKBP7Q9Y680 259 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
MED15-228ENST00000487550 SONP18583 2426 aaKnown RBP13.55□□□□□ -0.24
MED15-228ENST00000487550 ATP6V1G2-DDX39BF2Z307 99 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 CRYAAP02489 173 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 BCHEP06276 602 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 ETFAP13804 333 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 PDLIM4P50479 330 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 DSTNP60981 165 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
MED15-228ENST00000487550 SLC25A3Q00325 362 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 BNIP2Q12982 314 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 SWI5Q1ZZU3 235 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 PDCD4Q53EL6 469 aaKnown RBP13.54□□□□□ -0.24
MED15-228ENST00000487550 HIKESHIQ53FT3 197 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 PRAMEF8Q5VWM4 474 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 PRAMEF7Q5VXH5 474 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 STK35Q8TDR2 534 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
MED15-228ENST00000487550 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
MED15-228ENST00000487550 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 TPT1P8Q9HAU6 139 aa13.54□□□□□ -0.24
MED15-228ENST00000487550 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
MED15-228ENST00000487550 ZNF443Q9Y2A4 671 aaPredicted RBP13.54□□□□□ -0.24
MED15-228ENST00000487550 CR1P17927 2039 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 NDUFS8O00217 210 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 AHSA1O95433 338 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
MED15-228ENST00000487550 SERPINF1P36955 418 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 GZMKP49863 264 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 SNRPD2P62316 118 aaKnown RBP13.53□□□□□ -0.24
MED15-228ENST00000487550 MAPK11Q15759 364 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 MST1LQ2TV78 715 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 TBRG1Q3YBR2 411 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 NANOS1Q8WY41 292 aaKnown RBP13.53□□□□□ -0.24
MED15-228ENST00000487550 SLC38A2Q96QD8 506 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 SIKE1Q9BRV8 207 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 KATNB1Q9BVA0 655 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 SHARPINQ9H0F6 387 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 FBXO9Q9UK97 447 aaPredicted RBP13.53□□□□□ -0.24
MED15-228ENST00000487550 COL6A5A8TX70 2615 aa13.53□□□□□ -0.24
MED15-228ENST00000487550 DNHD1Q96M86 4753 aa13.52□□□□□ -0.24
MED15-228ENST00000487550 B9A039 149 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 LMX1BO60663 402 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 LGI1O95970 557 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 ZNF43P17038 809 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 SELENOPP49908 381 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 MVDP53602 400 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 C6orf10Q5SRN2 563 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 EPGNQ6UW88 154 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 ZNF540Q8NDQ6 660 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 MAGEE2Q8TD90 523 aaPredicted RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 STON2Q8WXE9 905 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 SLC25A36Q96CQ1 311 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 TMEM19Q96HH6 336 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 PIMREGQ9BSJ6 248 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 CCDC134Q9H6E4 229 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 MYOZ1Q9NP98 299 aaPredicted RBP13.52□□□□□ -0.25
MED15-228ENST00000487550 SLC6A13Q9NSD5 602 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 DSPPQ9NZW4 1301 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 ATRQ13535 2644 aa13.52□□□□□ -0.25
MED15-228ENST00000487550 HEATR1Q9H583 2144 aaKnown RBP13.51□□□□□ -0.25
MED15-228ENST00000487550 IGHV1-18A0A0C4DH31 117 aa13.51□□□□□ -0.25
MED15-228ENST00000487550 LOC390937A0A1W2PQ73 354 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms