RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 IRX1P78414 480 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 BNIP2Q12982 314 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 SLC9B1Q4ZJI4 515 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 ZNF311Q5JNZ3 666 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 RPS26P11Q5JNZ5 115 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 RNF220Q5VTB9 566 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 PRAMEF8Q5VWM4 474 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 PRAMEF7Q5VXH5 474 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 FAM168AQ92567 244 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 AURKBQ96GD4 344 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 TMEM19Q96HH6 336 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 SPATA9Q9BWV2 254 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 PIF1Q9H611 641 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 TMEM45AQ9NWC5 275 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 IGHV4-30-2A0A087WSY4 118 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 OR6C65A6NJZ3 312 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 ELOA3DA6NLF2 546 aaPredicted RBP11.6□□□□□ -0.55
UBA3-210ENST00000485424 A8MV72 311 aaPredicted RBP11.6□□□□□ -0.55
UBA3-210ENST00000485424 FRS3O43559 492 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 GPRIN2O60269 458 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
UBA3-210ENST00000485424 CSF3P09919 207 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 SLC25A16P16260 332 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 PAX7P23759 505 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 IL1RL1Q01638 556 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 ELOA3BQ3SY89 546 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 CHRFAM7AQ494W8 412 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 C1orf140Q5VVS0 124 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 C11orf71Q6IPW1 123 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 ELOA3Q8NG57 546 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 BBS10Q8TAM1 723 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 HTRA1Q92743 480 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 SLC25A36Q96CQ1 311 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 MAELQ96JY0 434 aaKnown RBP11.6□□□□□ -0.55
UBA3-210ENST00000485424 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
UBA3-210ENST00000485424 AMBRA1Q9C0C7 1298 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 OBP2BQ9NPH6 170 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 MOKQ9UQ07 419 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 RASD1Q9Y272 281 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 FKBP7Q9Y680 259 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 DSPPQ9NZW4 1301 aa11.6□□□□□ -0.55
UBA3-210ENST00000485424 ATP6V1G2-DDX39BF2Z307 99 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 H7C417 338 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 PDLIM1O00151 329 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 CLIC1O00299 241 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 POLR3GO15318 223 aaPredicted RBP11.59□□□□□ -0.55
UBA3-210ENST00000485424 CRYAAP02489 173 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 TFPTP0C1Z6 253 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 ACAA2P42765 397 aaKnown RBP11.59□□□□□ -0.55
UBA3-210ENST00000485424 SLC18A1P54219 525 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 NCALDP61601 193 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
UBA3-210ENST00000485424 FADDQ13158 208 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 GTDC1Q4AE62 458 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 B3GLCTQ6Y288 498 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 SERPINA11Q86U17 422 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 GOLGA6L1Q8N7Z2 621 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 STK35Q8TDR2 534 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 TMEM158Q8WZ71 300 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 VPS33AQ96AX1 596 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 FBXO17Q96EF6 278 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
UBA3-210ENST00000485424 SDR39U1Q9NRG7 319 aaPredicted RBP11.59□□□□□ -0.55
UBA3-210ENST00000485424 SLC6A13Q9NSD5 602 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 SELENONQ9NZV5 590 aa11.59□□□□□ -0.55
UBA3-210ENST00000485424 DYSFO75923 2080 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 KLF11O14901 512 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
UBA3-210ENST00000485424 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
UBA3-210ENST00000485424 ZNF43P17038 809 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 RPS5P46782 204 aaKnown RBP11.58□□□□□ -0.56
UBA3-210ENST00000485424 SELENOPP49908 381 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 EFNA4P52798 201 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 MVDP53602 400 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
UBA3-210ENST00000485424 RGNQ15493 299 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 KRT73Q86Y46 540 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 OR10H5Q8NGA6 315 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 OR9I1Q8NGQ6 314 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 OR1K1Q8NGR3 316 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 MFSD8Q8NHS3 518 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 SPATA5L1Q9BVQ7 753 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 MOV10Q9HCE1 1003 aaKnown RBP11.58□□□□□ -0.56
UBA3-210ENST00000485424 SLC13A4Q9UKG4 626 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 PCDHB14Q9Y5E9 798 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 USH1CQ9Y6N9 552 aa11.58□□□□□ -0.56
UBA3-210ENST00000485424 VSTM5A8MXK1 200 aa11.57□□□□□ -0.56
UBA3-210ENST00000485424 OR2T1O43869 369 aa11.57□□□□□ -0.56
UBA3-210ENST00000485424 LGI1O95970 557 aa11.57□□□□□ -0.56
UBA3-210ENST00000485424 FAM157CP0CG43 387 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms