RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RPS6KB2Q9UBS0 482 aa11.78□□□□□ -0.52
CTDSP1-208ENST00000482272 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
CTDSP1-208ENST00000482272 PMF1-BGLAPU3KQ54 211 aa11.78□□□□□ -0.52
CTDSP1-208ENST00000482272 USF3Q68DE3 2245 aa11.78□□□□□ -0.52
CTDSP1-208ENST00000482272 CR1P17927 2039 aa11.77□□□□□ -0.52
CTDSP1-208ENST00000482272 ELOA3DA6NLF2 546 aaPredicted RBP11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 FRS3O43559 492 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 TLX2O43763 284 aaPredicted RBP11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 BMP2P12643 396 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 ETS2P15036 469 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 MRPL19P49406 292 aaKnown RBP11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 IRX1P78414 480 aaPredicted RBP11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 SLC25A3Q00325 362 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 ELOA3BQ3SY89 546 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 TTMPQ5BVD1 217 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 AGBL2Q5U5Z8 902 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 ELOA3Q8NG57 546 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 LRRC8CQ8TDW0 803 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 MAL2Q969L2 176 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 SLC25A36Q96CQ1 311 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 SLC52A3Q9NQ40 469 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 SLC25A37Q9NYZ2 338 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 SLAMF8Q9P0V8 285 aa11.77□□□□□ -0.53
CTDSP1-208ENST00000482272 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 KIAA1324LA8MWY0 1029 aaPredicted RBP11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 CD5LO43866 347 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 OR2T1O43869 369 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 NPIPB7O75200 414 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 ZNF43P17038 809 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 PPIBP23284 216 aaKnown RBP11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 SELENOPP49908 381 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 P2RY4P51582 365 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 UBE2NP61088 152 aaKnown RBP11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 HOXC5Q00444 222 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 LRIF1Q5T3J3 769 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 NIPAL3Q6P499 406 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 BLOC1S3Q6QNY0 202 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 C5orf46Q6UWT4 87 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 B3GLCTQ6Y288 498 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 NET1Q7Z628 596 aaPredicted RBP11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 KRT73Q86Y46 540 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 OR10H5Q8NGA6 315 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 KCNS3Q9BQ31 491 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 CCDC28BQ9BUN5 200 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 SPATA5L1Q9BVQ7 753 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 YAE1D1Q9NRH1 226 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 CCDC167Q9P0B6 97 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 CUBNO60494 3623 aa11.76□□□□□ -0.53
CTDSP1-208ENST00000482272 NAV3Q8IVL0 2385 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 FTCDNL1E5RQL4 147 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 H7C417 338 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 PNMTP11086 282 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 PRKAR1BP31321 381 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 RPS5P46782 204 aaKnown RBP11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 IDH3AP50213 366 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 TBRG1Q3YBR2 411 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 GCNT6Q5T4J0 391 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 HMBOX1Q6NT76 420 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 REEP3Q6NUK4 255 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 DNAJA4Q8WW22 397 aaPredicted RBP11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 SPDL1Q96EA4 605 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 ZNF317Q96PQ6 595 aaPredicted RBP11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 IKZF5Q9H5V7 419 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 MOV10Q9HCE1 1003 aaKnown RBP11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 CORO2BQ9UQ03 480 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 MOKQ9UQ07 419 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 CADP27708 2225 aa11.75□□□□□ -0.53
CTDSP1-208ENST00000482272 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 ATP6V1G2-DDX39BF2Z307 99 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 LGI1O95970 557 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 CRYAAP02489 173 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 ARAFP10398 606 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 SLC25A16P16260 332 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 EFNA4P52798 201 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 CLDN17P56750 224 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 CDK6Q00534 326 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 EGR4Q05215 589 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 C1DQ13901 141 aaKnown RBP11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 C6orf89Q6UWU4 347 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 LINGO2Q7L985 606 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 KDM8Q8N371 416 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 LSMEM1Q8N8F7 131 aa11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 BHLHE22Q8NFJ8 381 aaPredicted RBP11.74□□□□□ -0.53
CTDSP1-208ENST00000482272 NFKBIDQ8NI38 313 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms