RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 GRPRP30550 384 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 UGT2B10P36537 528 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 OR3A2P47893 321 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 LSM11P83369 360 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDAC3-208ENST00000476739 MXRA7P84157 204 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 SORDQ00796 357 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 FXNQ16595 210 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 ANKRD34AQ69YU3 496 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 STAC2Q6ZMT1 411 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 GALNT5Q7Z7M9 940 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 GPAT4Q86UL3 456 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 GABRG1Q8N1C3 465 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 FAM86B1Q8N7N1 296 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 ZIC4Q8N9L1 334 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 MFSD8Q8NHS3 518 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 FAM162AQ96A26 154 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 SLC41A3Q96GZ6 507 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 WFIKKN1Q96NZ8 548 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF385AQ96PM9 386 aaKnown RBP8.59□□□□□ -1.03
HDAC3-208ENST00000476739 TAPBPLQ9BX59 468 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 KLHL4Q9C0H6 718 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 ELOVL5Q9NYP7 299 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 SELENONQ9NZV5 590 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 A4GNTQ9UNA3 340 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 FLVCR1Q9Y5Y0 555 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 PRR14LQ5THK1 2151 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 TRAV36DV7A0A075B6V5 113 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ENO4A6NNW6 628 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 M0R082 166 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 KPNA4O00629 521 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 FFAR1O14842 300 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 FZD7O75084 574 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 HPRP00739 348 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ADAP00813 363 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 HSD17B1P14061 328 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 CALB2P22676 271 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 FOXG1P55316 489 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 TAS2R41P59536 307 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 TLE4Q04727 773 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 FAM69AQ5T7M9 428 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 C16orf89Q6UX73 402 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 BEND4Q6ZU67 534 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 TRPM8Q7Z2W7 1104 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 CXorf67Q86X51 503 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 KIF18BQ86Y91 864 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 EPHX4Q8IUS5 362 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 OR9K2Q8NGE7 335 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 PFN4Q8NHR9 129 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF417Q8TAU3 575 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM255BQ8WV15 326 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 PPP1R14BQ96C90 147 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 C14orf79Q96F83 325 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF587Q96SQ5 575 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM43Q9BTV4 400 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF426Q9BUY5 554 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 MEPEQ9NQ76 525 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 B3GAT1Q9P2W7 334 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 RHCGQ9UBD6 479 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 KCNN3Q9UGI6 736 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 RIMS3Q9UJD0 308 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 ITGB1BP2Q9UKP3 347 aa8.58□□□□□ -1.04
HDAC3-208ENST00000476739 NOSIPQ9Y314 301 aaKnown RBP8.58□□□□□ -1.04
HDAC3-208ENST00000476739 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 MS4A18H0YCH9 400 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 C16orf97H3BN30 126 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 ARPC2O15144 300 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 SIAH2O43255 324 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 OR2T1O43869 369 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 PDE5AO76074 875 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 UBOX5O94941 541 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 OR5F1O95221 314 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 EPXP11678 715 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 HLA-DOBP13765 273 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 UGT2B15P54855 530 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 LGALS3BPQ08380 585 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF74Q16587 644 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 MS4A18Q3C1V0 323 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 IFI44LQ53G44 452 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 SAMD4BQ5PRF9 694 aaKnown RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM225Q6GV28 225 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 TTC33Q6PID6 262 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 C5orf46Q6UWT4 87 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 CREB3L2Q70SY1 520 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 FKBP9P1Q75LS8 142 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 STK32CQ86UX6 486 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 WDFY1Q8IWB7 410 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF100Q8IYN0 542 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 LRRC17Q8N6Y2 441 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 GEMIN6Q8WXD5 167 aaKnown RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 APH1AQ96BI3 265 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 ZC3HAV1LQ96H79 300 aaKnown RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 PRRC1Q96M27 445 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 DACH2Q96NX9 599 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 SF3B5Q9BWJ5 86 aaKnown RBP8.57□□□□□ -1.04
HDAC3-208ENST00000476739 GORASP2Q9H8Y8 452 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 MAN2C1Q9NTJ4 1040 aa8.57□□□□□ -1.04
HDAC3-208ENST00000476739 C20orf141Q9NUB4 165 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms