RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PAGE3Q5JUK9 113 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 C6orf10Q5SRN2 563 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 FRRS1Q6ZNA5 592 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 C17orf78Q8N4C9 275 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 OIT3Q8WWZ8 545 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 ROPN1LQ96C74 230 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 FBXO17Q96EF6 278 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 NAA11Q9BSU3 229 aaPredicted RBP13.66□□□□□ -0.22
SRRT-209ENST00000474896 C19orf24Q9BVV8 132 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 CHODLQ9H9P2 273 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 POLE3Q9NRF9 147 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 LEF1Q9UJU2 399 aaPredicted RBP13.66□□□□□ -0.22
SRRT-209ENST00000474896 MOKQ9UQ07 419 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 FLVCR1Q9Y5Y0 555 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 TMED7-TICAM2A0A0A6YYA0 188 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 LOC100653049A0A140TA62 436 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 LOC100289279A0A1B0GTE1 492 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 TMEM72A0PK05 275 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 SLC35F4A4IF30 521 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 VWC2LB2RUY7 222 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 ATP6V1G2-DDX39BF2Z307 99 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 EIF1BO60739 113 aaKnown RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 KRT34O76011 436 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 GSNP06396 782 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 C8BP07358 591 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 IMPDH2P12268 514 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 CDH2P19022 906 aaPredicted RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 UQCRC2P22695 453 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 IGFBP5P24593 272 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 HTR3AP46098 478 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 PRPS1P60891 318 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 CBX1P83916 185 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 FUT5Q11128 374 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 SLC17A1Q14916 467 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 SWI5Q1ZZU3 235 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 GPAT3Q53EU6 434 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 FAM120AOSQ5T036 256 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 FAM166AQ6J272 317 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 RETREG3Q86VR2 466 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 TRIML2Q8N7C3 387 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 C1orf162Q8NEQ5 155 aaPredicted RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 CNOT9Q92600 299 aaKnown RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 PMM1Q92871 262 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 C3orf49Q96BT1 292 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 DDIT4LQ96D03 193 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 PAIP1Q9H074 479 aaKnown RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
SRRT-209ENST00000474896 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 TMED7Q9Y3B3 224 aa13.65□□□□□ -0.22
SRRT-209ENST00000474896 SVEP1Q4LDE5 3571 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 A0A096LPI6 279 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 BBIP1A8MTZ0 92 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 FBP2O00757 339 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 AP3D1O14617 1153 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 ANP32DO95626 131 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 WNT11O96014 354 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 COX4I1P13073 169 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 MPGP29372 298 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 NR4A2P43354 598 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
SRRT-209ENST00000474896 PLAURQ03405 335 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 CARTPTQ16568 116 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 COQ5Q5HYK3 327 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 LRIF1Q5T3J3 769 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 FAM91A1Q658Y4 838 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 REP15Q6BDI9 236 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 DPP10Q8N608 796 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 RP9Q8TA86 221 aaKnown RBP13.64□□□□□ -0.23
SRRT-209ENST00000474896 MSI2Q96DH6 328 aaKnown RBP13.64□□□□□ -0.23
SRRT-209ENST00000474896 FOXN4Q96NZ1 517 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 SORCS2Q96PQ0 1159 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 PIMREGQ9BSJ6 248 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 SLC6A13Q9NSD5 602 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 OSGIN1Q9UJX0 560 aa13.64□□□□□ -0.23
SRRT-209ENST00000474896 ZNF208O43345 1280 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
SRRT-209ENST00000474896 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
SRRT-209ENST00000474896 TACR3P29371 465 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 PRDX6P30041 224 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 MMEL1Q495T6 779 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 HIKESHIQ53FT3 197 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 C1QTNF12Q5T7M4 302 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 KLHL24Q6TFL4 600 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 FITM2Q8N6M3 262 aa13.63□□□□□ -0.23
SRRT-209ENST00000474896 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms