RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 CCDC153Q494R4 210 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 GPAT3Q53EU6 434 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 C1orf229Q6ZS94 237 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 FAM169BQ8N8A8 192 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 TWIST2Q8WVJ9 160 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 CNOT9Q92600 299 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 RAB8BQ92930 207 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 COQ8BQ96D53 544 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZG16BQ96DA0 208 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 PPP3R2Q96LZ3 170 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 TAPBPLQ9BX59 468 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 ESM1Q9NQ30 184 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 EXOSC3Q9NQT5 275 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZNF275Q9NSD4 429 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 PPIAL4AQ9Y536 164 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 NOX1Q9Y5S8 564 aa16.33■□□□□ 0.2
NCKIPSD-209ENST00000470006 LIPT2A6NK58 231 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 AGR2O95994 175 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 CXCR1P25024 350 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 ARR3P36575 388 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 ALDH3B1P43353 468 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 SH3BGRP55822 239 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 TMEM33P57088 247 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 ARF1P84077 181 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 KANK2Q63ZY3 851 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 REP15Q6BDI9 236 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 TNFAIP8L2Q6P589 184 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 LINGO2Q7L985 606 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 GSPT2Q8IYD1 628 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZDHHC22Q8N966 263 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 IL17RDQ8NFM7 739 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 NANPQ8TBE9 248 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 C22orf15Q8WYQ4 148 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 ROPN1LQ96C74 230 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 SYT3Q9BQG1 590 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 MRPL37Q9BZE1 423 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 PIF1Q9H611 641 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 NOX3Q9HBY0 568 aa16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 PSMC3IPQ9P2W1 217 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-209ENST00000470006 A0A0G2JMP0 313 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 A0A0X1KG70 313 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 A0A1W2PPM1 405 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 TMEM233B4DJY2 109 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 MPZL1O95297 269 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 HKR1P10072 659 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 UQCRBP14927 111 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 FPR2P25090 351 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 MAP2K6P52564 334 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 LMO4P61968 165 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 IL23RQ5VWK5 629 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 ACSM5Q6NUN0 579 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 RBMS3Q6XE24 437 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 RNF165Q6ZSG1 346 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 CREB3L2Q70SY1 520 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZNF572Q7Z3I7 529 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 C1QL2Q7Z5L3 287 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 CLECL1Q8IZS7 167 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 LRRC17Q8N6Y2 441 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 OR4M2Q8NGB6 313 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 OIT3Q8WWZ8 545 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 RACGAP1Q9H0H5 632 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 NELFAQ9H3P2 528 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
NCKIPSD-209ENST00000470006 PLIN3O60664 434 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 ARAFP10398 606 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 PRPS1L1P21108 318 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 CCT5P48643 541 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 SEC24CP53992 1094 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 ETF1P62495 437 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 PRAMEF8Q5VWM4 474 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 PRAMEF7Q5VXH5 474 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 FRRS1Q6ZNA5 592 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 MDP1Q86V88 176 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 RIBC1Q8N443 379 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 FNDC5Q8NAU1 212 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 OR4A15Q8NGL6 344 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 AGR3Q8TD06 166 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 YIPF5Q969M3 257 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZNF416Q9BWM5 594 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 G6PC2Q9NQR9 355 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 CORINQ9Y5Q5 1042 aa16.3■□□□□ 0.2
NCKIPSD-209ENST00000470006 VAMP5O95183 116 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 CHRM4P08173 479 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 ABHD2P08910 425 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 NR4A1P22736 598 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 EVX1P49640 407 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 POU3F1Q03052 451 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 MAD2L1BPQ15013 274 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 DCAF12L2Q5VW00 463 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 SYT10Q6XYQ8 523 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 C10orf107Q8IVU9 208 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 TMPRSS13Q9BYE2 586 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 LINC00470Q9BZP3 86 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 ZNF665Q9H7R5 613 aa16.29■□□□□ 0.2
NCKIPSD-209ENST00000470006 NTN4Q9HB63 628 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms