RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CPA3P15088 417 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ACHEP22303 614 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ECHS1P30084 290 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 LMO4P61968 165 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ETF1P62495 437 aaKnown RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 UBA52P62987 128 aaKnown RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ROR2Q01974 943 aaKnown RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PDCD2Q16342 344 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 MSMPQ1L6U9 139 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 SLC9B1Q4ZJI4 515 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ATAD3BQ5T9A4 648 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 TMEM225Q6GV28 225 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 TNFAIP8L2Q6P589 184 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 C1QL2Q7Z5L3 287 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 CLECL1Q8IZS7 167 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 MZB1Q8WU39 189 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 RDH5Q92781 318 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PIF1Q9H611 641 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 NOX3Q9HBY0 568 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 CRLF2Q9HC73 371 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 G6PC2Q9NQR9 355 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 ZNF275Q9NSD4 429 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PSMC3IPQ9P2W1 217 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 M0R233 179 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 LYPLA1O75608 230 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ABHD2P08910 425 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ADRA2CP18825 462 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ARF1P84077 181 aaKnown RBP14.34□□□□□ -0.11
CHMP3-203ENST00000409225 MYBPC1Q00872 1141 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 POU3F1Q03052 451 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-203ENST00000409225 FUT5Q11128 374 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 FOXL1Q12952 345 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 PGS1Q32NB8 556 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ZNF311Q5JNZ3 666 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 CREB3L2Q70SY1 520 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 OIT3Q8WWZ8 545 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ROPN1LQ96C74 230 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 PPP3R2Q96LZ3 170 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 SYT3Q9BQG1 590 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 POLE3Q9NRF9 147 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ADPRHL2Q9NX46 363 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 PPIAL4AQ9Y536 164 aa14.34□□□□□ -0.11
CHMP3-203ENST00000409225 ZNF503-AS2A6NEH8 195 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 HKR1P10072 659 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 ARAFP10398 606 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 ARR3P36575 388 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 CAPZA2P47755 286 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 SEC24CP53992 1094 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 SH3BGRP55822 239 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-203ENST00000409225 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
CHMP3-203ENST00000409225 IL23RQ5VWK5 629 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 AP1ARQ63HQ0 302 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 MDP1Q86V88 176 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 RIBC1Q8N443 379 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-203ENST00000409225 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-203ENST00000409225 TAPBPLQ9BX59 468 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 TMPRSS13Q9BYE2 586 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 SLC52A3Q9NQ40 469 aa14.33□□□□□ -0.12
CHMP3-203ENST00000409225 DDX28Q9NUL7 540 aaKnown RBP14.33□□□□□ -0.12
CHMP3-203ENST00000409225 TMEM229AB2RXF0 380 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 AGR2O95994 175 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 CHRNGP07510 517 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 GUSBP08236 651 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 PRPS1L1P21108 318 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 NR4A1P22736 598 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 CXCR1P25024 350 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 P2RY4P51582 365 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 MAP2K6P52564 334 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 TMEM33P57088 247 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 MAD2L1BPQ15013 274 aaPredicted RBP14.32□□□□□ -0.12
CHMP3-203ENST00000409225 UGT3A2Q3SY77 523 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 GPAT3Q53EU6 434 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 OR4F3Q6IEY1 312 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 EPHX4Q8IUS5 362 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 C10orf107Q8IVU9 208 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 RIMKLAQ8IXN7 391 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 FNDC5Q8NAU1 212 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 OR4A15Q8NGL6 344 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 MIPOL1Q8TD10 442 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 C22orf15Q8WYQ4 148 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 LINC00470Q9BZP3 86 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 MS4A5Q9H3V2 200 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 ZNF665Q9H7R5 613 aa14.32□□□□□ -0.12
CHMP3-203ENST00000409225 A0A0G2JMP0 313 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 A0A0X1KG70 313 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 NCR1O76036 304 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 MPZL1O95297 269 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 ANPEPP15144 967 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 EVX1P49640 407 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 HPCAP84074 193 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 BNIP2Q12982 314 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 PRAMEF8Q5VWM4 474 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms