RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 EFNA4P52798 201 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 STX1BP61266 288 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
CAPN3-204ENST00000356316 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 CHRFAM7AQ494W8 412 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 HIKESHIQ53FT3 197 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 RNF220Q5VTB9 566 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 C1orf140Q5VVS0 124 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 C11orf71Q6IPW1 123 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 CREB3L2Q70SY1 520 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 CXXC5Q7LFL8 322 aaKnown RBP9.33□□□□□ -0.92
CAPN3-204ENST00000356316 OR10H5Q8NGA6 315 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 HTRA1Q92743 480 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 ZNF385AQ96PM9 386 aaKnown RBP9.33□□□□□ -0.92
CAPN3-204ENST00000356316 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 SPATA9Q9BWV2 254 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 AMBRA1Q9C0C7 1298 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 MOV10Q9HCE1 1003 aaKnown RBP9.33□□□□□ -0.92
CAPN3-204ENST00000356316 SDR39U1Q9NRG7 319 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-204ENST00000356316 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
CAPN3-204ENST00000356316 DSPPQ9NZW4 1301 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 CADP27708 2225 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 TLN2Q9Y4G6 2542 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 CLIC1O00299 241 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 GPRIN2O60269 458 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ZNF500O60304 480 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ERLIN1O75477 346 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 F12P00748 615 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 PRG2P13727 222 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ZNF43P17038 809 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 MMP16P51512 607 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 SNRPD2P62316 118 aaKnown RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 C1DQ13901 141 aaKnown RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 MAPK11Q15759 364 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 SLC9B1Q4ZJI4 515 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 RPS26P11Q5JNZ5 115 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 CYB5R2Q6BCY4 276 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 B3GLCTQ6Y288 498 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 SERPINA11Q86U17 422 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 CLIP4Q8N3C7 705 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ZNF525Q8N782 197 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 GOLGA6L1Q8N7Z2 621 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ZIC4Q8N9L1 334 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 MFSD8Q8NHS3 518 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 STK35Q8TDR2 534 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 PROX1Q92786 737 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 VPS33AQ96AX1 596 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 FBXO17Q96EF6 278 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 TMEM19Q96HH6 336 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
CAPN3-204ENST00000356316 SLC6A13Q9NSD5 602 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 SELENONQ9NZV5 590 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 FKBP7Q9Y680 259 aa9.32□□□□□ -0.92
CAPN3-204ENST00000356316 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 ATP6V1G2-DDX39BF2Z307 99 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 OR2T1O43869 369 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 LGI1O95970 557 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SERPINF1P36955 418 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SELENOPP49908 381 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 MVDP53602 400 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SH3BGRP55822 239 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SLC25A3Q00325 362 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 IL1RL1Q01638 556 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 RGNQ15493 299 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 TBRG1Q3YBR2 411 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 ANKRD16Q6P6B7 361 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 C5orf46Q6UWT4 87 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 KRT73Q86Y46 540 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 GPR137CQ8N3F9 429 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 OR1K1Q8NGR3 316 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 BBS10Q8TAM1 723 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SLC35B4Q969S0 331 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 C3orf49Q96BT1 292 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 BOD1Q96IK1 185 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 ZNF317Q96PQ6 595 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SLC38A2Q96QD8 506 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 OR52B2Q96RD2 323 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 VRK1Q99986 396 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SPATA5L1Q9BVQ7 753 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 BEX2Q9BXY8 128 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 BCL2L10Q9HD36 194 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 FBXO9Q9UK97 447 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-204ENST00000356316 SLC13A4Q9UKG4 626 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 PCDHB14Q9Y5E9 798 aa9.31□□□□□ -0.92
CAPN3-204ENST00000356316 A0A096LPE4 126 aa9.3□□□□□ -0.92
CAPN3-204ENST00000356316 IGHV1-18A0A0C4DH31 117 aa9.3□□□□□ -0.92
CAPN3-204ENST00000356316 A0A1W2PPZ6 126 aa9.3□□□□□ -0.92
CAPN3-204ENST00000356316 RNF212BA8MTL3 300 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms