RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 Q499Y3 187 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 TMEM225Q6GV28 225 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 Q6ZSR6 202 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 OR5T3Q8NGG3 340 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 OR2A1Q8NGT9 310 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 ORAI1Q96D31 301 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 V9GYH0 126 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 AGAP14A8MT82 685 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 PRKACAP17612 351 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.44
DDX54-201ENST00000306014 P2RX3P56373 397 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 GCDHQ92947 438 aaPredicted RBP12.27□□□□□ -0.44
DDX54-201ENST00000306014 UCN3Q969E3 161 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 NCDNQ9UBB6 729 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 CPNE7Q9UBL6 633 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 PLEKHB1Q9UF11 243 aaPredicted RBP12.27□□□□□ -0.44
DDX54-201ENST00000306014 EXO1Q9UQ84 846 aaKnown RBP12.27□□□□□ -0.44
DDX54-201ENST00000306014 SLC6A5Q9Y345 797 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 ADAM18Q9Y3Q7 739 aa12.27□□□□□ -0.44
DDX54-201ENST00000306014 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 CDC14CA4D256 554 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 MEGF11A6BM72 1044 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 ITGB8P26012 769 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 CDK5Q00535 292 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 GPR18Q14330 331 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 FAM189A2Q15884 450 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 NKAPLQ5M9Q1 402 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 CARD17Q5XLA6 110 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 FAAP20Q6NZ36 180 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 TSSK4Q6SA08 328 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 TMEM151BQ8IW70 566 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 IQCF2Q8IXL9 164 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 DAZLQ92904 295 aaKnown RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 SLC25A44Q96H78 314 aaPredicted RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 Q96M85 177 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 CDCA3Q99618 268 aaPredicted RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 NRTNQ99748 197 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 PELOQ9BRX2 385 aaKnown RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 HDAC8Q9BY41 377 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 METTL7AQ9H8H3 244 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 F8W036 122 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 CHP2O43745 196 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 SLC2A5P22732 501 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 FBXL6Q8N531 539 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 OR51D1Q8NGF3 324 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 PMM1Q92871 262 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 DVL3Q92997 716 aaPredicted RBP12.27□□□□□ -0.45
DDX54-201ENST00000306014 PHB2Q99623 299 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 FGF22Q9HCT0 170 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 SLC23A1Q9UHI7 598 aa12.27□□□□□ -0.45
DDX54-201ENST00000306014 LINC01553A4QN01 128 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 NPC1O15118 1278 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 SRPX2O60687 465 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 AMY2BP19961 511 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 S100GP29377 79 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 HEPHL1Q6MZM0 1159 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 USP53Q70EK8 1073 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 MCATQ8IVS2 390 aaKnown RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 ZNF587Q96SQ5 575 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 SLC6A17Q9H1V8 727 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 GPN3Q9UHW5 284 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 GPR55Q9Y2T6 319 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 THEGLP0DJG4 465 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 CLRN1P58418 232 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 RAB2AP61019 212 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX54-201ENST00000306014 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 STX12Q86Y82 276 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 DNAAF1Q8NEP3 725 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 OR4K17Q8NGC6 315 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 UPRTQ96BW1 309 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 ULBP3Q9BZM4 244 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 AUNIPQ9H7T9 357 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 ZMAT3Q9HA38 289 aaKnown RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 PCDHB16Q9NRJ7 776 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 REV1Q9UBZ9 1251 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 DAPP1Q9UN19 280 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 PIKFYVEQ9Y2I7 2098 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 SEC16AO15027 2179 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 HIST1H1CP16403 213 aaKnown RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 ZNF41P51814 821 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 IL13RA1P78552 427 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 CDKN3Q16667 212 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 TMEM201Q5SNT2 666 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 C1orf189Q5VU69 101 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 YOD1Q5VVQ6 348 aaPredicted RBP12.26□□□□□ -0.45
DDX54-201ENST00000306014 AWAT2Q6E213 333 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 TMEM184AQ6ZMB5 413 aa12.26□□□□□ -0.45
DDX54-201ENST00000306014 GKN2Q86XP6 184 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms