RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 C11orf71Q6IPW1 123 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 CXXC5Q7LFL8 322 aaKnown RBP10.46□□□□□ -0.74
UPF3B-204ENST00000619445 AAED1Q7RTV5 226 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 HIPK1Q86Z02 1210 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 ELOA3Q8NG57 546 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 OR10H5Q8NGA6 315 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 OR9K2Q8NGE7 335 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 OR52P1PQ8NH57 321 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 TEX37Q96LM6 180 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 SLC7A10Q9NS82 523 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 TMEM45AQ9NWC5 275 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 NKIRAS1Q9NYS0 192 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 RASD1Q9Y272 281 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 DSPPQ9NZW4 1301 aa10.46□□□□□ -0.74
UPF3B-204ENST00000619445 A8MV72 311 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 ZNF587BE7ETH6 402 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 NCF2P19878 526 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 IL12AP29459 219 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 CRATP43155 626 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 EFNA4P52798 201 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 SH3BGRP55822 239 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 NME5P56597 212 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 DSTNP60981 165 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 LOXL1Q08397 574 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 FADDQ13158 208 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 CEACAM7Q14002 265 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 MPP2Q14168 576 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 C3orf36Q3SXR2 165 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 CHRFAM7AQ494W8 412 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 TSPO2Q5TGU0 170 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 NXNQ6DKJ4 435 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 C5orf46Q6UWT4 87 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 OR52E4Q8NGH9 312 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 STK35Q8TDR2 534 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 PROX1Q92786 737 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 MAELQ96JY0 434 aaKnown RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 SPATA9Q9BWV2 254 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 TPT1P8Q9HAU6 139 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 SDR39U1Q9NRG7 319 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 YAE1D1Q9NRH1 226 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 GDF2Q9UK05 429 aaPredicted RBP10.45□□□□□ -0.74
UPF3B-204ENST00000619445 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 FKBP7Q9Y680 259 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
UPF3B-204ENST00000619445 TMEM120BA0PK00 339 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 VSTM5A8MXK1 200 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 GSNP06396 782 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 TFPTP0C1Z6 253 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 GTF2E2P29084 291 aaKnown RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 NTF4P34130 210 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 CDKN2CP42773 168 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 VLDLRP98155 873 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 OR7A5Q15622 319 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 COX20Q5RI15 118 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 HMGN2P46Q86SG4 172 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 GPAT4Q86UL3 456 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 CADM2Q8N3J6 435 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 TMEM99Q8N816 258 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 WDR31Q8NA23 367 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 PNPT1Q8TCS8 783 aaKnown RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 SLC38A5Q8WUX1 472 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 FAM168AQ92567 244 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 TNFRSF13CQ96RJ3 184 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 WDR55Q9H6Y2 383 aaPredicted RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 MANSC1Q9H8J5 431 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 C12orf10Q9HB07 376 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 MYOZ1Q9NP98 299 aaPredicted RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 LPAR3Q9UBY5 353 aa10.44□□□□□ -0.74
UPF3B-204ENST00000619445 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 ZNF443Q9Y2A4 671 aaPredicted RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 V9GYY5 206 aaPredicted RBP10.44□□□□□ -0.74
UPF3B-204ENST00000619445 ZC3H12DA2A288 527 aaKnown RBP10.43□□□□□ -0.74
UPF3B-204ENST00000619445 NDUFS8O00217 210 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 KLF11O14901 512 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 UBDO15205 165 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
UPF3B-204ENST00000619445 OR2T1O43869 369 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 NDUFS7O75251 213 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 PDE5AO76074 875 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 AKR7A3O95154 331 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 AHSA1O95433 338 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 CRYAAP02489 173 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 BCHEP06276 602 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 ACAA2P42765 397 aaKnown RBP10.43□□□□□ -0.74
UPF3B-204ENST00000619445 UBE2NP61088 152 aaKnown RBP10.43□□□□□ -0.74
UPF3B-204ENST00000619445 SNRPD2P62316 118 aaKnown RBP10.43□□□□□ -0.74
UPF3B-204ENST00000619445 TMEM249Q2WGJ8 235 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 C6orf10Q5SRN2 563 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 C1orf140Q5VVS0 124 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 HMBOX1Q6NT76 420 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 ZNF836Q6ZNA1 936 aa10.43□□□□□ -0.74
UPF3B-204ENST00000619445 CCDC36Q8IYA8 594 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms