RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 OR2T29Q8NH02 315 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 OR5K1Q8NHB7 308 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 SMAP2Q8WU79 429 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 SLC9A6Q92581 669 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 FBXW5Q969U6 566 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 OMA1Q96E52 524 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 PIGUQ9H490 435 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 EVA1AQ9H8M9 152 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 POLE3Q9NRF9 147 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 DUSP22Q9NRW4 184 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 PRODH2Q9UF12 536 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 IFT52Q9Y366 437 aa15.68■□□□□ 0.1
TRAPPC3-209ENST00000616395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.67■□□□□ 0.11e-7■■■■□ 20.6
TRAPPC3-209ENST00000616395 H0YC42 278 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 ZIC3O60481 467 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 UGT2B11O75310 529 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 HPRP00739 348 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 UQCRBP14927 111 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 CDH2P19022 906 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 TPD52P55327 224 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 CLDN15P56746 228 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 ZNF155Q12901 538 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 GUSBP1Q15486 140 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 NPSR1Q6W5P4 371 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 PEX5LQ8IYB4 626 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 COX18Q8N8Q8 333 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 FNDC9Q8TBE3 224 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 NEUROG1Q92886 237 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 NRBF2Q96F24 287 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 HS6ST2Q96MM7 605 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 RDH12Q96NR8 316 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 COL21A1Q96P44 957 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 RHNO1Q9BSD3 238 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 PINK1Q9BXM7 581 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 COQ10BQ9H8M1 238 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 DKKL1Q9UK85 242 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 OAZ3Q9UMX2 235 aa15.67■□□□□ 0.1
TRAPPC3-209ENST00000616395 PRSS23O95084 383 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 RAD23AP54725 363 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 B3GALT5-AS1P59052 145 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 PLCXD2Q0VAA5 305 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 LARS2Q15031 903 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 RFX4Q33E94 735 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 OR5M10Q6IEU7 315 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 ALKBH2Q6NS38 261 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 FAM214BQ7L5A3 538 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 OR5D16Q8NGK9 328 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 TMBIM1Q969X1 311 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 LCORQ96JN0 433 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 TNFRSF13CQ96RJ3 184 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 RBM4BQ9BQ04 359 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 RBM4Q9BWF3 364 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 ACTR6Q9GZN1 396 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 MTHFD2LQ9H903 347 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 FOLH1BQ9HBA9 442 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 BARX1Q9HBU1 254 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 RNF115Q9Y4L5 304 aa15.66■□□□□ 0.1
TRAPPC3-209ENST00000616395 SSX4O60224 188 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 SRD5A1P18405 259 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 DPP4P27487 766 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 AQP4P55087 323 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 POU6F2P78424 691 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 VLDLRP98155 873 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 ZSWIM7Q19AV6 140 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 ARHGAP11BQ3KRB8 267 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 STK32CQ86UX6 486 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 CBR4Q8N4T8 237 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 OR4N2Q8NGD1 307 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 GPR151Q8TDV0 419 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 VSTM2LQ96N03 204 aa15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 MRTO4Q9UKD2 239 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 MRPS18CQ9Y3D5 142 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 GPC6Q9Y625 555 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC3-209ENST00000616395 B4DXG7 233 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 STX11O75558 287 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 MFN2O95140 757 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 MT-ND1P03886 318 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 OPN1SWP03999 348 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 CT45A8P0DMV1 189 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 CT45A9P0DMV2 189 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 PEPDP12955 493 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 SUCLG1P53597 346 aaKnown RBP15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 PSPHP78330 225 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 KCNJ10P78508 379 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 PON3Q15166 354 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 SYPL1Q16563 259 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 NRF1Q16656 503 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 CT45A2Q5DJT8 189 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 IL17RELQ6ZVW7 336 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 FAM86B1Q8N7N1 296 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 MAGEE2Q8TD90 523 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 TAMM41Q96BW9 452 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 NR1H4Q96RI1 486 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 EPYCQ99645 322 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 ESRP2Q9H6T0 727 aaKnown RBP15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 Q9N2J8 555 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 PLSCR4Q9NRQ2 329 aa15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 SMPD3Q9NY59 655 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3-209ENST00000616395 KIF17Q9P2E2 1029 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms