RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 PDSS1Q5T2R2 415 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 FAHD1Q6P587 224 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 GFRALQ6UXV0 394 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 TMPRSS11FQ6ZWK6 438 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 HIST3H2AQ7L7L0 130 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 EPHX4Q8IUS5 362 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 OR6S1Q8NH40 331 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 NEIL3Q8TAT5 605 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 NRG4Q8WWG1 115 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 SMPDL3BQ92485 455 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 HIST1H2ACQ93077 130 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 ABTB1Q969K4 478 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-208ENST00000564247 TAAR8Q969N4 342 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 GTPBP3Q969Y2 492 aaKnown RBP15.25■□□□□ 0.03
CMTM3-208ENST00000564247 KTI12Q96EK9 354 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-208ENST00000564247 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
CMTM3-208ENST00000564247 OR5B2Q96R09 309 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 SLC29A1Q99808 456 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 TAPBPLQ9BX59 468 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 UCK2Q9BZX2 261 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 OR11A1Q9GZK7 315 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 SLC6A15Q9H2J7 730 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 TMEM185BQ9H7F4 350 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 USE1Q9NZ43 259 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 SLC6A5Q9Y345 797 aa15.25■□□□□ 0.03
CMTM3-208ENST00000564247 DIDO1Q9BTC0 2240 aaKnown RBP15.25■□□□□ 0.03
CMTM3-208ENST00000564247 DNAJC13O75165 2243 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 ZC3H12DA2A288 527 aaKnown RBP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 NPIPA5E9PKD4 350 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 NPIPB7O75200 414 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 CH25HO95992 272 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 OPN1LWP04000 364 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 SAGP10523 405 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 CDH2P19022 906 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 FUT1P19526 365 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 GTF2E2P29084 291 aaKnown RBP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 SFTPDP35247 375 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 RPS5P46782 204 aaKnown RBP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 OMPP47874 163 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 DAPP51397 102 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 RAD23AP54725 363 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 NUP107P57740 925 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 LSM11P83369 360 aaKnown RBP eCLIP15.24■□□□□ 0.03
CMTM3-208ENST00000564247 TSPAN31Q12999 210 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 KRTCAP3Q53RY4 240 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 CMPK2Q5EBM0 449 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 FAM69AQ5T7M9 428 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 TRILQ7L0X0 811 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 MFSD8Q8NHS3 518 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 SLC25A36Q96CQ1 311 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 KLHL15Q96M94 604 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 NANSQ9NR45 359 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 KRT84Q9NSB2 600 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 ENOPH1Q9UHY7 261 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 NPIPA1Q9UND3 350 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 POFUT2Q9Y2G5 429 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 ZNF407Q9C0G0 2248 aa15.24■□□□□ 0.03
CMTM3-208ENST00000564247 UNC119BA6NIH7 251 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 LRRTM2O43300 516 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 OR7A10O76100 309 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 MT-ATP6P00846 226 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 IGHG3P01860 377 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 ALPLP05186 524 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 ZNF26P17031 533 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-208ENST00000564247 BMP7P18075 431 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 IGFBP5P24593 272 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 FPR3P25089 353 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 GPR4P46093 362 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 SLC9A3P48764 834 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 STARP49675 285 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 OR2B6P58173 313 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 PPP2R2BQ00005 443 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 ZNF74Q16587 644 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 RFX4Q33E94 735 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 C1QL3Q5VWW1 255 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 KDM4DQ6B0I6 523 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 CD300LDQ6UXZ3 194 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 TMPPEQ6ZT21 453 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 ESPNLQ6ZVH7 1005 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 MAMDC2Q7Z304 686 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-208ENST00000564247 SIAH3Q8IW03 269 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 MEIOBQ8N635 442 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 GPR137Q96N19 417 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 TSPAN10Q9H1Z9 355 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-208ENST00000564247 TIGARQ9NQ88 270 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 PAPOLBQ9NRJ5 636 aaKnown RBP15.23■□□□□ 0.03
CMTM3-208ENST00000564247 TRAPPC4Q9Y296 219 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 MED12Q93074 2177 aa15.23■□□□□ 0.03
CMTM3-208ENST00000564247 A0A1B0GUH1 482 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 H0YJX3 145 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 SULT2B1O00204 365 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 EIF1AYO14602 144 aaKnown RBP15.22■□□□□ 0.03
CMTM3-208ENST00000564247 WISP2O76076 250 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 MAKP20794 623 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 GSSP48637 474 aa15.22■□□□□ 0.03
CMTM3-208ENST00000564247 RPS3AP61247 264 aaKnown RBP15.22■□□□□ 0.03
CMTM3-208ENST00000564247 CSNK2A1P68400 391 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-208ENST00000564247 SLC35A1P78382 337 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms