RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DTX3Q8N9I9 347 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 OR4K14Q8NGD5 310 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 FAM45AQ8TCE6 357 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 ZNF473Q8WTR7 871 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 CLPTM1LQ96KA5 538 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 SSBP3Q9BWW4 388 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 TBL1XR1Q9BZK7 514 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 DECR2Q9NUI1 292 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 FZR1Q9UM11 496 aa8.72□□□□□ -1.01
HDGFL3-204ENST00000563790 NR5A2O00482 541 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 SCDO00767 359 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 ZNF195O14628 629 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 SBK2P0C263 348 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 THRBP10828 461 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 CBR1P16152 277 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 ZNF14P17017 642 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 EPHA3P29320 983 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 SLC7A1P30825 629 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 SLC16A1P53985 500 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 TGFBIQ15582 683 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 SPANXN3Q5MJ09 141 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 KCTD18Q6PI47 426 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 CASP12Q6UXS9 341 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 MRPL41Q8IXM3 137 aaKnown RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 PPIL6Q8IXY8 311 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 FITM2Q8N6M3 262 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 OR1K1Q8NGR3 316 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 MAGEE2Q8TD90 523 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 BCL2L2Q92843 193 aaPredicted RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 ESAMQ96AP7 390 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 THOC1Q96FV9 657 aaKnown RBP8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 MS4A14Q96JA4 679 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 PCGF1Q9BSM1 259 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 CRLF2Q9HC73 371 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 HHATLQ9HCP6 504 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 GPR160Q9UJ42 338 aa8.71□□□□□ -1.02
HDGFL3-204ENST00000563790 AQP7P3A6NL99 342 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 SAP18O00422 153 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 TPD52L2O43399 206 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 TMPRSS11DO60235 418 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 SH3BGRLO75368 114 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 CHRM4P08173 479 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 UROSP10746 265 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 MAKP20794 623 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 PTMSP20962 102 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 ROR2Q01974 943 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 COX10Q12887 443 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 FOXF1Q12946 379 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 FRG1Q14331 258 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 TBCCQ15814 346 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 FXNQ16595 210 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 COX20Q5RI15 118 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 ZNF774Q6NX45 483 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 CCDC137Q6PK04 289 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 PAQR6Q6TCH4 344 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 SLC44A2Q8IWA5 706 aaPredicted RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 LAS2Q8IYD9 372 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 RNF175Q8N4F7 328 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 C11orf42Q8N5U0 333 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 SNX33Q8WV41 574 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 MAGOHBQ96A72 148 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 KLHDC3Q9BQ90 382 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 NUDT16L1Q9BRJ7 211 aaKnown RBP8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 TMEM45AQ9NWC5 275 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 OR10H1Q9Y4A9 318 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 TEX264Q9Y6I9 313 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
HDGFL3-204ENST00000563790 PLPP1O14494 284 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 NME6O75414 186 aaPredicted RBP8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 FBP1P09467 338 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 SLC6A2P23975 617 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 GALK2Q01415 458 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 OR4D1Q15615 310 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 FAM209AQ5JX71 171 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 KHDRBS2Q5VWX1 349 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 ADAMTSL2Q86TH1 951 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 LRRC28Q86X40 367 aaPredicted RBP8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 PDPRQ8NCN5 879 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 DDOQ99489 341 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 EGFL8Q99944 293 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 EFCAB11Q9BUY7 163 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 DERL2Q9GZP9 239 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 NANOGQ9H9S0 305 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 PARPBPQ9NWS1 579 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 TAAR3PQ9P1P4 343 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 FAM96BQ9Y3D0 163 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 NOX1Q9Y5S8 564 aa8.69□□□□□ -1.02
HDGFL3-204ENST00000563790 A0A0A6YYD5 115 aa8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 FAM95CA0A1B0GW59 222 aa8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 NCF1BA6NI72 391 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 NCF1CA8MVU1 366 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 DNALI1O14645 258 aaPredicted RBP8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 TGFB1P01137 390 aa8.68□□□□□ -1.02
HDGFL3-204ENST00000563790 FAM58BPP0C7Q3 252 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms