RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 OR52B2Q96RD2 323 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 SF3B5Q9BWJ5 86 aaKnown RBP10.9□□□□□ -0.66
CSMD1-205ENST00000519623 CACNG6Q9BXT2 260 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 PIF1Q9H611 641 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 CALML5Q9NZT1 146 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 P2RX2Q9UBL9 471 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
CSMD1-205ENST00000519623 IGHV4-30-2A0A087WSY4 118 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 A0A096LNT2 108 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 A0A0G2JPF8 293 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 AQP7P3A6NL99 342 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 A8MVM7 634 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 HNRNPCL2B2RXH8 293 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 HNRNPCL3B7ZW38 293 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 UBDO15205 165 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 CD5LO43866 347 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 HNRNPCL1O60812 293 aaKnown RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 NPIPB7O75200 414 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 BCHEP06276 602 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 HNRNPCL4P0DMR1 293 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 FABP6P51161 128 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 POLR2JP52435 117 aaKnown RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 CRISP3P54108 245 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 DSTNP60981 165 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 TGFBR3Q03167 851 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 DMTNQ08495 405 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 NRF1Q16656 503 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 ZSWIM7Q19AV6 140 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 LIN52Q52LA3 116 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 RNF220Q5VTB9 566 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 MSANTD1Q6ZTZ1 278 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 FBXL14Q8N1E6 418 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 MUC15Q8N387 334 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 C17orf78Q8N4C9 275 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 OR9I1Q8NGQ6 314 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 GTF2H4Q92759 462 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 TMEM19Q96HH6 336 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 ITCHQ96J02 903 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 ADAD1Q96M93 576 aaKnown RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 RHNO1Q9BSD3 238 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 SPATA9Q9BWV2 254 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 RSPO3Q9BXY4 272 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 RMND5AQ9H871 391 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 ZNF232Q9UNY5 417 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 ZNF443Q9Y2A4 671 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-205ENST00000519623 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 PCDHB14Q9Y5E9 798 aa10.89□□□□□ -0.67
CSMD1-205ENST00000519623 KLF11O14901 512 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 TLX2O43763 284 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-205ENST00000519623 GPRIN2O60269 458 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 ANP32DO95626 131 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 NUDT7P0C024 238 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 HOXB9P17482 250 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-205ENST00000519623 PRPS1P60891 318 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 COPZ1P61923 177 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 LARS2Q15031 903 aaKnown RBP10.88□□□□□ -0.67
CSMD1-205ENST00000519623 RGNQ15493 299 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 C1orf140Q5VVS0 124 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 TMEM225Q6GV28 225 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 ZNF544Q6NX49 715 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 CREB3L2Q70SY1 520 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 SERPINA11Q86U17 422 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 EPHX4Q8IUS5 362 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 HTRA1Q92743 480 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 C3orf49Q96BT1 292 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 PAIP1Q9H074 479 aaKnown RBP10.88□□□□□ -0.67
CSMD1-205ENST00000519623 TMBIM4Q9HC24 238 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 BCL2L10Q9HD36 194 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 ADPRHL2Q9NX46 363 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 THUMPD1Q9NXG2 353 aaKnown RBP10.88□□□□□ -0.67
CSMD1-205ENST00000519623 NKIRAS1Q9NYS0 192 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 IFT52Q9Y366 437 aa10.88□□□□□ -0.67
CSMD1-205ENST00000519623 MXRA5Q9NR99 2828 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 FAM234BA2RU67 622 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-205ENST00000519623 TMEM229AB2RXF0 380 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 H7C417 338 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 FRS3O43559 492 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 VAMP5O95183 116 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 TP53P04637 393 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-205ENST00000519623 BMP2P12643 396 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 APOBEC3AP31941 199 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-205ENST00000519623 SELENOPP49908 381 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 NUDT6P53370 316 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 EGR4Q05215 589 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 LGALS3BPQ08380 585 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 RAB35Q15286 201 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 MST1LQ2TV78 715 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 HIKESHIQ53FT3 197 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 EPGNQ6UW88 154 aa10.87□□□□□ -0.67
CSMD1-205ENST00000519623 LINGO2Q7L985 606 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms