RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SRMP19623 302 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 MAOBP27338 520 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 SIRPAP78324 504 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 GAB4Q2WGN9 574 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 TMEM69Q5SWH9 247 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 RELL2Q8NC24 303 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 C1orf216Q8TAB5 229 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 TMEM239Q8WW34 195 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 NXPE3Q969Y0 559 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PITHD1Q9GZP4 211 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 SLC25A18Q9H1K4 315 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 NOX4Q9NPH5 578 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 FOXJ3Q9UPW0 622 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 ATG2BQ96BY7 2078 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 TRIOO75962 3097 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 A0A1W2PPV9 198 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 TRAPPC13A5PLN9 417 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 ZNF879B4DU55 563 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 F5H5P2 479 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 SIGLEC6O43699 453 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 AIFM1O95831 613 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PPP2CBP62714 309 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PPP2CAP67775 309 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 CSNK1G2P78368 415 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 RPL13AP3Q6NVV1 102 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 OR6K3Q8NGY3 331 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 ADAMTS15Q8TE58 950 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 S100A16Q96FQ6 103 aaKnown RBP17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PDCD1LG2Q9BQ51 273 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 USB1Q9BQ65 265 aaKnown RBP17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 MACROD1Q9BQ69 325 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 ACTRT3Q9BYD9 372 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PCBD2Q9H0N5 130 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 POT1Q9NUX5 634 aa17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 PURGQ9UJV8 347 aaKnown RBP17.8■□□□□ 0.44
SNAPC3-206ENST00000490969 TRBV2A0A0J9YWF9 115 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 C4orf51C9J302 202 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 PRRT4C9JH25 899 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 PRAMEF2O60811 474 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 ZNF3P17036 446 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 CLDN12P56749 244 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 MRPS10P82664 201 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 C18orf63Q68DL7 685 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 ZNF433Q8N7K0 673 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 OR4C6Q8NH72 309 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 NKX6-2Q9C056 277 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 SLC25A32Q9H2D1 315 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 MRTO4Q9UKD2 239 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 SIGLEC7Q9Y286 467 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 A0A1B0GW55 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 ACOT7O00154 380 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L2P0CJ85 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L3P0CJ86 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L4P0CJ87 422 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L5P0CJ88 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L6P0CJ89 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4L7P0CJ90 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 MST1P26927 711 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 MPGP29372 298 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 GMFBP60983 142 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 FGL1Q08830 312 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 POU4F2Q12837 409 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 TANGO2Q6ICL3 276 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 SLC36A1Q7Z2H8 476 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 RANBP3LQ86VV4 465 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 RNF113BQ8IZP6 322 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 ARL14Q8N4G2 192 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 SYNPRQ8TBG9 265 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 GIMAP5Q96F15 307 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 CCDC86Q9H6F5 360 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 CACYBPQ9HB71 228 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 DUX4Q9UBX2 424 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 GPR34Q9UPC5 381 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 SLC6A5Q9Y345 797 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 LRRK1Q38SD2 2015 aa17.79■□□□□ 0.44
SNAPC3-206ENST00000490969 GOSR2O14653 212 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 PIN1P1O15428 100 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 CDC123O75794 336 aaPredicted RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 ADH5P11766 374 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MAPK3P27361 379 aaPredicted RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 HTR2AP28223 471 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MPIP34949 423 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 RPL35P42766 123 aaKnown RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 HOXA1P49639 335 aaPredicted RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 METAP1P53582 386 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MC2RQ01718 297 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 CBFBQ13951 182 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 DCAF12L2Q5VW00 463 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 UNQ9370/PRO34162Q6UXP9 181 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 SYS1Q8N2H4 156 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 SLC16A11Q8NCK7 471 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 OR5K2Q8NHB8 316 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 NUS1Q96E22 293 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MENTQ9BUN1 341 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MFFQ9GZY8 342 aa17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 MTHFD2LQ9H903 347 aaPredicted RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 ZMAT5Q9UDW3 170 aaKnown RBP17.78■□□□□ 0.44
SNAPC3-206ENST00000490969 CES1P1Q9UKY3 287 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms