RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CPOXP36551 454 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 OR3A2P47893 321 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 CEACAM7Q14002 265 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 SLC17A1Q14916 467 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 POU4F3Q15319 338 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 OR7A5Q15622 319 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 SAMD4BQ5PRF9 694 aaKnown RBP14.12□□□□□ -0.15
UPF3A-208ENST00000484246 FAM69AQ5T7M9 428 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 C16orf89Q6UX73 402 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 GDF7Q7Z4P5 450 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 STK32CQ86UX6 486 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 RBM45Q8IUH3 476 aaKnown RBP14.12□□□□□ -0.15
UPF3A-208ENST00000484246 ZNF295-AS1Q8N0V1 137 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 ADPRHL1Q8NDY3 354 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 VANGL1Q8TAA9 524 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-208ENST00000484246 BCAS4Q8TDM0 211 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 FAM222BQ8WU58 562 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 MPP4Q96JB8 637 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 ZNF300Q96RE9 604 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-208ENST00000484246 EPYCQ99645 322 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 TAPBPLQ9BX59 468 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 SLC19A3Q9BZV2 496 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 OR10A4Q9H209 315 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 FANCFQ9NPI8 374 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 ADPRHL2Q9NX46 363 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 CD300AQ9UGN4 299 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 SH3GLB1Q9Y371 365 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 TEX15Q9BXT5 2789 aa14.12□□□□□ -0.15
UPF3A-208ENST00000484246 RAMP1O60894 148 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 VAMP5O95183 116 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 OR5F1O95221 314 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 THY1P04216 161 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 CALB2P22676 271 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 MFSD13AQ14CX5 517 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 OTUD3Q5T2D3 398 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-208ENST00000484246 BEND4Q6ZU67 534 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 NUFIP2Q7Z417 695 aaKnown RBP14.11□□□□□ -0.15
UPF3A-208ENST00000484246 GALNT5Q7Z7M9 940 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 GABRG1Q8N1C3 465 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 ARHGAP24Q8N264 748 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 GEMIN6Q8WXD5 167 aaKnown RBP14.11□□□□□ -0.15
UPF3A-208ENST00000484246 TMEM45BQ96B21 275 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 KTI12Q96EK9 354 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-208ENST00000484246 NSL1Q96IY1 281 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 GORASP2Q9H8Y8 452 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 ADA2Q9NZK5 511 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 CORINQ9Y5Q5 1042 aa14.11□□□□□ -0.15
UPF3A-208ENST00000484246 UTP20O75691 2785 aaKnown RBP14.1□□□□□ -0.15
UPF3A-208ENST00000484246 CPSF4LA6NMK7 179 aaKnown RBP14.1□□□□□ -0.15
UPF3A-208ENST00000484246 GSTA4O15217 222 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 IGF2P01344 180 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 POU2F1P14859 743 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 PSMB1P20618 241 aaKnown RBP14.1□□□□□ -0.15
UPF3A-208ENST00000484246 UGT2B10P36537 528 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 KIR2DL3P43628 341 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 SLC25A3Q00325 362 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 WDR88Q6ZMY6 472 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 CCDC103Q8IW40 242 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 TMEM99Q8N816 258 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 SCAIQ8N9R8 606 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 SLC41A3Q96GZ6 507 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 DACH2Q96NX9 599 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 MAGEL2Q9UJ55 1249 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 RASD1Q9Y272 281 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 B3GALT5Q9Y2C3 310 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 TESMINQ9Y4I5 508 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 FLVCR1Q9Y5Y0 555 aa14.1□□□□□ -0.15
UPF3A-208ENST00000484246 LOC102725191A0A1B0GVB3 256 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 TUBAL3A6NHL2 446 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 AKR7A3O95154 331 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 MT-ATP6P00846 226 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 SERPINA1P01009 418 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 T-ENOLP0DO92 83 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 PRF1P14222 555 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 TNFRSF1BP20333 461 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 RBM34P42696 430 aaKnown RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 RPS5P46782 204 aaKnown RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 FAM27E3Q08E93 113 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 DAZAP2Q15038 168 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 P2RY6Q15077 328 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 IFI44LQ53G44 452 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 Q6ZT83 130 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 TRPM8Q7Z2W7 1104 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 LSRQ86X29 649 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 DEFB107AQ8IZN7 70 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 RBM15BQ8NDT2 890 aaKnown RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 OR9K2Q8NGE7 335 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 TAAR8Q969N4 342 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 DNAJA3Q96EY1 480 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 PRRC1Q96M27 445 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 PRSS27Q9BQR3 290 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 CRIM1Q9NZV1 1036 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 RPS6KA6Q9UK32 745 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 SLC7A7Q9UM01 511 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 MED12LQ86YW9 2145 aa14.09□□□□□ -0.15
UPF3A-208ENST00000484246 INTS1Q8N201 2190 aaKnown RBP14.09□□□□□ -0.15
UPF3A-208ENST00000484246 HCFC1P51610 2035 aa14.08□□□□□ -0.15
UPF3A-208ENST00000484246 ANKHD1Q8IWZ3 2542 aaKnown RBP14.08□□□□□ -0.15
UPF3A-208ENST00000484246 FAM221AA4D161 298 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 C16orf97H3BN30 126 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms