RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ADPRHL2Q9NX46 363 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 AQP7P3A6NL99 342 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 ZNF587BE7ETH6 402 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 FAAHO00519 579 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 TM9SF1O15321 606 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 BIRC5O15392 142 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 RGS16O15492 202 aaPredicted RBP11.57□□□□□ -0.56
VCL-205ENST00000478896 F12P00748 615 aaPredicted RBP11.57□□□□□ -0.56
VCL-205ENST00000478896 GSNP06396 782 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 PGRP06401 933 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 GKN3PP0CG01 181 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 SRD5A1P18405 259 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 BGNP21810 368 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 RPS4Y1P22090 263 aaKnown RBP11.57□□□□□ -0.56
VCL-205ENST00000478896 CDKN2CP42773 168 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 COPZ1P61923 177 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 UFM1P61960 85 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 IQCCQ4KMZ1 466 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 LIN52Q52LA3 116 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 AP1ARQ63HQ0 302 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 LRRC34Q8IZ02 419 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 ARIH2OSQ8N7S6 290 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 SORCS2Q96PQ0 1159 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 SLC38A2Q96QD8 506 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 OR52E6Q96RD3 313 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 ZBTB18Q99592 522 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 MTHFD2LQ9H903 347 aaPredicted RBP11.57□□□□□ -0.56
VCL-205ENST00000478896 MEAF6Q9HAF1 191 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 CACYBPQ9HB71 228 aaKnown RBP11.57□□□□□ -0.56
VCL-205ENST00000478896 OBP2BQ9NPH6 170 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 TMEM45AQ9NWC5 275 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 P2RX2Q9UBL9 471 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 ARFGEF3Q5TH69 2177 aa11.57□□□□□ -0.56
VCL-205ENST00000478896 IGHV1-18A0A0C4DH31 117 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 NDUFS8O00217 210 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 FRS3O43559 492 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 KRT75O95678 551 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 CRYAAP02489 173 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 BCHEP06276 602 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 ALDOCP09972 364 aaKnown RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 APEHP13798 732 aaKnown RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 NCF2P19878 526 aaPredicted RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 HNF1AP20823 631 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 IGFBP5P24593 272 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 LRRC74AQ0VAA2 488 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 BNIP2Q12982 314 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 STX3Q13277 289 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 GSTA3Q16772 222 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 TBRG1Q3YBR2 411 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 COX20Q5RI15 118 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 PRAMEF8Q5VWM4 474 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 PRAMEF7Q5VXH5 474 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 WBP2NLQ6ICG8 309 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 OGFOD2Q6N063 350 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 NIPAL3Q6P499 406 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 ZNF836Q6ZNA1 936 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 IL17RELQ6ZVW7 336 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 SPATA19Q7Z5L4 167 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 OR1K1Q8NGR3 316 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 OR52P1PQ8NH57 321 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 AENQ8WTP8 325 aaKnown RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 TEX37Q96LM6 180 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 PAIP2Q9BPZ3 127 aaKnown RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 CENPHQ9H3R5 247 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 MYOZ1Q9NP98 299 aaPredicted RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
VCL-205ENST00000478896 FBN1P35555 2871 aaKnown RBP11.56□□□□□ -0.56
VCL-205ENST00000478896 FBN3Q75N90 2809 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 A8MVM7 634 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 RFXANKO14593 260 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 ANP32DO95626 131 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 LGI1O95970 557 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 PAX7P23759 505 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 GTF2E2P29084 291 aaKnown RBP11.55□□□□□ -0.56
VCL-205ENST00000478896 SERPINF1P36955 418 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 CRATP43155 626 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 NR4A2P43354 598 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 SELENOPP49908 381 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 CRISP3P54108 245 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 SWI5Q1ZZU3 235 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 ANKS4BQ8N8V4 417 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 KATNB1Q9BVA0 655 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 ADAM19Q9H013 955 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 PIF1Q9H611 641 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 KCNK9Q9NPC2 374 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 CA10Q9NS85 328 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 PNPOQ9NVS9 261 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 AIG1Q9NVV5 245 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 CALML5Q9NZT1 146 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
VCL-205ENST00000478896 A0A096LPE4 126 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 A0A1W2PPZ6 126 aa11.54□□□□□ -0.56
VCL-205ENST00000478896 LOC390937A0A1W2PQ73 354 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms