RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PMP2P02689 132 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 PKLRP30613 574 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 DLSTP36957 453 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 UBE2MP61081 183 aaKnown RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 TMEM52BQ4KMG9 183 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 WBP2NLQ6ICG8 309 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ACSM5Q6NUN0 579 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ZSCAN1Q8NBB4 408 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 CLEC1AQ8NC01 280 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 FGGYQ96C11 551 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 CSF3RQ99062 836 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 TSNAXQ99598 290 aaKnown RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 BCL7BQ9BQE9 202 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 PARP12Q9H0J9 701 aaKnown RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 SCML1Q9UN30 329 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ZNF337Q9Y3M9 751 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ZNF175Q9Y473 711 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 S100A2P29034 98 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 EPHA2P29317 976 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 SUOXP51687 545 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 CXADRP78310 365 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 GNMTQ14749 295 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 ALKBH6Q3KRA9 238 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 FAM199XQ6PEV8 388 aaPredicted RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 DNAJC22Q8N4W6 341 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 DCLRE1CQ96SD1 692 aaKnown RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 CDCA3Q99618 268 aaPredicted RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 ALG12Q9BV10 488 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 HOXD1Q9GZZ0 328 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 BANF2Q9H503 90 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 APMAPQ9HDC9 416 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 NOX4Q9NPH5 578 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
RIF1-205ENST00000444746 EMC9Q9Y3B6 208 aa7.4□□□□□ -1.22
RIF1-205ENST00000444746 AHDC1Q5TGY3 1603 aaPredicted RBP7.4□□□□□ -1.23
RIF1-205ENST00000444746 CELA2BP08218 269 aaPredicted RBP7.4□□□□□ -1.23
RIF1-205ENST00000444746 OMGP23515 440 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 AGERQ15109 404 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 PYCR3Q53H96 274 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 SLC48A1Q6P1K1 146 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 CYHR1Q6ZMK1 362 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 SFXN5Q8TD22 340 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 MS4A6EQ96DS6 147 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 ELP4Q96EB1 424 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 ADAM18Q9Y3Q7 739 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 HSPE1-MOB4S4R3N1 261 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 F5H5P2 479 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 ZNF254O75437 659 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 OR8U9P0C7N5 309 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 M6PRP20645 277 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 CRABP1P29762 137 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 OR4N2Q8NGD1 307 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 PAQR8Q8TEZ7 354 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 RPH3ALQ9UNE2 315 aa7.4□□□□□ -1.23
RIF1-205ENST00000444746 SLC5A10A0PJK1 596 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 FAM221AA4D161 298 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 SLCO2B1O94956 709 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 GPANK1O95872 356 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 DAP3P51398 398 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 DYRK1AQ13627 763 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 ADPRMQ3LIE5 342 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 EXOSC6Q5RKV6 272 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 ZNF695Q8IW36 515 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 MS4A15Q8N5U1 240 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 TCTN2Q96GX1 697 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 HSFX1Q9UBD0 423 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 LRIT2A6NDA9 550 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 ARHGEF15O94989 841 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 IFNGR1P15260 489 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 TCN2P20062 427 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 RPL35P42766 123 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 SLC1A3P43003 542 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 ETV1P50549 477 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 PRSS12P56730 875 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 SELENOVP59797 346 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 PLGLAQ15195 96 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 CHST8Q9H2A9 424 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 CHRDQ9H2X0 955 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 FOXE1O00358 373 aaPredicted RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 HMGN4O00479 90 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 CHRNB1P11230 501 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 NR2C1P13056 603 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 FOXL2P58012 376 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 RELAQ04206 551 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 TMEM196Q5HYL7 178 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 C16orf47Q6ZP98 133 aaPredicted RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 GIMAP1Q8WWP7 306 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 CCDC86Q9H6F5 360 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 ACOXLQ9NUZ1 547 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 FAM155AB1AL88 458 aaPredicted RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 ACOT7O00154 380 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 TMEM11P17152 192 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 RPS18P62269 152 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 TSPAN31Q12999 210 aa7.39□□□□□ -1.23
RIF1-205ENST00000444746 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
RIF1-205ENST00000444746 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms