RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FZD7O75084 574 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 SS18L1O75177 396 aaPredicted RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 AKR7A3O95154 331 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 CGAP01215 116 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 GPIP06744 558 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 CBLP22681 906 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 GRNP28799 593 aaKnown RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 SLC35A1P78382 337 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 LSM11P83369 360 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP39-205ENST00000442708 TFF3Q07654 80 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 LCN8Q6JVE9 175 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 DHFR2Q86XF0 187 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 TUSC5Q8IXB3 177 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 TMEM99Q8N816 258 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 CNEP1R1Q8N9A8 125 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 MFSD8Q8NHS3 518 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 TMEM255BQ8WV15 326 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 SLC25A36Q96CQ1 311 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 ASB9Q96DX5 294 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 MOGAT1Q96PD6 335 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 ZNF300Q96RE9 604 aaPredicted RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 PSD2Q9BQI7 771 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 SFXN3Q9BWM7 321 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 POLR2J2Q9GZM3 115 aaKnown RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 POLR2J3Q9H1A7 115 aaKnown RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 MEPEQ9NQ76 525 aaPredicted RBP14.28□□□□□ -0.12
USP39-205ENST00000442708 NDUFAF4Q9P032 175 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 KLHL13Q9P2N7 655 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 ENPP4Q9Y6X5 453 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 TRAV36DV7A0A075B6V5 113 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 ZNF716A6NP11 495 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 DNPH1O43598 174 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 ATP5HO75947 161 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 DIRAS1O95057 198 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 AHSA1O95433 338 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 IL18BPO95998 194 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 BGLAPP02818 100 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 CRHP06850 196 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 AGTR1P30556 359 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 OPRM1P35372 400 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 UGT2B15P54855 530 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 RASGEF1BQ0VAM2 473 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 FAM214BQ7L5A3 538 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 ZNF775Q96BV0 537 aaPredicted RBP14.27□□□□□ -0.13
USP39-205ENST00000442708 GMPPAQ96IJ6 420 aaPredicted RBP14.27□□□□□ -0.13
USP39-205ENST00000442708 MUC13Q9H3R2 512 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 JKAMPQ9P055 326 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 FREM1Q5H8C1 2179 aa14.27□□□□□ -0.13
USP39-205ENST00000442708 ADGRG4Q8IZF6 3080 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 AQP7P3A6NL99 342 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 KPNA4O00629 521 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 DVL2O14641 736 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 PLGP00747 810 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 EDNRAP25101 427 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 NTF4P34130 210 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 TRAP1Q12931 704 aaKnown RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 RNPS1Q15287 305 aaKnown RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 SLC25A35Q3KQZ1 300 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 OTUD3Q5T2D3 398 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 FAM69AQ5T7M9 428 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 TTC33Q6PID6 262 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 PAQR6Q6TCH4 344 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 NUFIP2Q7Z417 695 aaKnown RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 MCEMP1Q8IX19 187 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 OFCC1Q8IZS5 231 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 SLC43A2Q8N370 569 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 PFN4Q8NHR9 129 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 ZHX1-C8orf76Q96EF9 292 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 MPP4Q96JB8 637 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 TAPBPLQ9BX59 468 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 OPN3Q9H1Y3 402 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 LRMDAQ9H2I8 198 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 NPDC1Q9NQX5 325 aaPredicted RBP14.26□□□□□ -0.13
USP39-205ENST00000442708 C20orf141Q9NUB4 165 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 SLC7A8Q9UHI5 535 aa14.26□□□□□ -0.13
USP39-205ENST00000442708 IGKV3D-15A0A087WSY6 115 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 EEF1E1-BLOC1S5C9J1V9 151 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 M0R082 166 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 EEF1E1O43324 174 aaKnown RBP14.25□□□□□ -0.13
USP39-205ENST00000442708 PIP5K1CO60331 668 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 EIF1BO60739 113 aaKnown RBP14.25□□□□□ -0.13
USP39-205ENST00000442708 MT-ND1P03886 318 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 THRBP10828 461 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 COL8A1P27658 744 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 GRPRP30550 384 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 CTBP2P56545 445 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 ST3GAL3Q11203 375 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 SLC17A1Q14916 467 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 GTF2IRD2BQ6EKJ0 949 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 C5orf46Q6UWT4 87 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 ASRGL1Q7L266 308 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 MAMDC2Q7Z304 686 aaPredicted RBP14.25□□□□□ -0.13
USP39-205ENST00000442708 GTF2IRD2Q86UP8 949 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 OR6S1Q8NH40 331 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 ZNF417Q8TAU3 575 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 PIGXQ8TBF5 258 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 TMEM239Q8WW34 195 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 ZNF587Q96SQ5 575 aaPredicted RBP14.25□□□□□ -0.13
USP39-205ENST00000442708 SEPHS2Q99611 448 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms