RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 GPR18Q14330 331 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 ST3GAL2Q16842 350 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 UBE2NLQ5JXB2 153 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 TEX261Q6UWH6 196 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 UNQ9370/PRO34162Q6UXP9 181 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 RNF44Q7L0R7 432 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 SIX5Q8N196 739 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 ZNF614Q8N883 585 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 OR52R1Q8NGF1 315 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 LGALS14Q8TCE9 139 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 GIMAP1Q8WWP7 306 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 OR14A2Q96R54 314 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 HEXA-AS1Q9H8Q6 139 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 UCKL1Q9NWZ5 548 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 RABL2AQ9UBK7 228 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 RABL2BQ9UNT1 228 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 MRPS7Q9Y2R9 242 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 TMA7Q9Y2S6 64 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 U3KQ87 197 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 A0A1W2PQ72 361 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 LINC00862A6NCI5 91 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 GPR171O14626 319 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 MT-ND4P03905 459 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 RAF1P04049 648 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 WNT1P04628 370 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 TYRP1P17643 537 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 HNRNPA2B1P22626 353 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 UQCRC1P31930 480 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 NAA10P41227 235 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 LSSP48449 732 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 STARD6P59095 220 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 DGAT2L6Q6ZPD8 337 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 CDH24Q86UP0 819 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 TSTD1Q8NFU3 115 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 OR56B4Q8NH76 319 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 OR14A16Q8NHC5 309 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 BAHD1Q8TBE0 780 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 TOE1Q96GM8 510 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 BMFQ96LC9 184 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 SMAD5Q99717 465 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 ORAI3Q9BRQ5 295 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 LMF2Q9BU23 707 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 ACTR6Q9GZN1 396 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 AUNIPQ9H7T9 357 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 AK6Q9Y3D8 172 aaKnown RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 MCIDASD6RGH6 385 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 PVRP15151 417 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 GDNFP39905 211 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 DIO1P49895 249 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 PSG6Q00889 435 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 CCDC28AQ8IWP9 274 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 ELMOD2Q8IZ81 293 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 FRMD1Q8N878 549 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 ZNF680Q8NEM1 530 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 RPS4Y2Q8TD47 263 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 PHYHIPQ92561 330 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 MS4A3Q96HJ5 214 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 SHDQ96IW2 340 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 PLEKHA1Q9HB21 404 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 EMC3Q9P0I2 261 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 NCDNQ9UBB6 729 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 GNG8Q9UK08 70 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 IER3IP1Q9Y5U9 82 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 AUP1Q9Y679 476 aa15.03■□□□□ -0
CLCNKA-203ENST00000439316 TRBV2A0A0J9YWF9 115 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 RASGRP1O95267 797 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 APBB3O95704 486 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 IGKV1D-16P01601 117 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 IGLV3-19P01714 112 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SYPP08247 313 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SLC35E2P0CK97 266 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 EDNRAP25101 427 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SNTB2Q13425 540 aaKnown RBP15.02■□□□□ -0
CLCNKA-203ENST00000439316 COL28A1Q2UY09 1125 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 MANEAQ5SRI9 462 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SIGIRRQ6IA17 410 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 ULK3Q6PHR2 472 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 ZC3H14Q6PJT7 736 aaKnown RBP15.02■□□□□ -0
CLCNKA-203ENST00000439316 KIRREL2Q6UWL6 708 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 CMTM4Q8IZR5 234 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 OR51L1Q8NGJ5 315 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 ZNF671Q8TAW3 534 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SNX33Q8WV41 574 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 MARVELD3Q96A59 401 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 SGTBQ96EQ0 304 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 TPSD1Q9BZJ3 242 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 CCDC86Q9H6F5 360 aaKnown RBP15.02■□□□□ -0
CLCNKA-203ENST00000439316 COPS3Q9UNS2 423 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 NPTNQ9Y639 398 aa15.02■□□□□ -0
CLCNKA-203ENST00000439316 A0A1B0GTQ1 180 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF879B4DU55 563 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 GPRIN2O60269 458 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 IGHV4-34P06331 123 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 RAB38P57729 211 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 LGALS3BPQ08380 585 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 CAMK2DQ13557 499 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 PRSS45Q7RTY3 260 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 IZUMO1Q8IYV9 350 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF527Q8NB42 609 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 MAFAQ8NHW3 353 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms