RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GPRIN2O60269 458 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 VAMP5O95183 116 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 C1QCP02747 245 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 IL6P05231 212 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 IL12AP29459 219 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 CRISP3P54108 245 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 NME5P56597 212 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 SLC25A3Q00325 362 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 CEACAM7Q14002 265 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 OR7A5Q15622 319 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 TNFAIP8L3Q5GJ75 292 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 COX20Q5RI15 118 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 RNF220Q5VTB9 566 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 WBP2NLQ6ICG8 309 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 C10orf105Q8TEF2 133 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 TMEM158Q8WZ71 300 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 PROX1Q92786 737 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
MSH5-208ENST00000429846 TAPBPLQ9BX59 468 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 MOV10Q9HCE1 1003 aaKnown RBP13.03□□□□□ -0.32
MSH5-208ENST00000429846 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 THUMPD1Q9NXG2 353 aaKnown RBP13.03□□□□□ -0.32
MSH5-208ENST00000429846 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 GPR45Q9Y5Y3 372 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 A8MVM7 634 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 ATP6V1G2-DDX39BF2Z307 99 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 HDAC3O15379 428 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 AKR7A3O95154 331 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 IDO1P14902 403 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 ZIC4Q8N9L1 334 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 OR52P1PQ8NH57 321 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 PNPT1Q8TCS8 783 aaKnown RBP13.02□□□□□ -0.33
MSH5-208ENST00000429846 HTRA1Q92743 480 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 ZNF385AQ96PM9 386 aaKnown RBP13.02□□□□□ -0.33
MSH5-208ENST00000429846 CENPHQ9H3R5 247 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 ARMC7Q9H6L4 198 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.33
MSH5-208ENST00000429846 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 THAP1Q9NVV9 213 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 TMEM45AQ9NWC5 275 aa13.02□□□□□ -0.33
MSH5-208ENST00000429846 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 ZNF587BE7ETH6 402 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 SLCO1B7G3V0H7 640 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 NDUFS8O00217 210 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 FRS3O43559 492 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 KRT33AO76009 404 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 BCHEP06276 602 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 GSNP06396 782 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 ZCCHC18P0CG32 403 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 EPHA3P29320 983 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 ACAA2P42765 397 aaKnown RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 MVDP53602 400 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 SNRPD2P62316 118 aaKnown RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 MPP2Q14168 576 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 LARS2Q15031 903 aaKnown RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 MAPK11Q15759 364 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 PDCD4Q53EL6 469 aaKnown RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 CEP85LQ5SZL2 805 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 MSANTD1Q6ZTZ1 278 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 CADM2Q8N3J6 435 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 KCNS3Q9BQ31 491 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 KATNB1Q9BVA0 655 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 MYOZ1Q9NP98 299 aaPredicted RBP13.01□□□□□ -0.33
MSH5-208ENST00000429846 RLIMQ9NVW2 624 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
MSH5-208ENST00000429846 SLC22A3O75751 556 aa13□□□□□ -0.33
MSH5-208ENST00000429846 PDE5AO76074 875 aa13□□□□□ -0.33
MSH5-208ENST00000429846 ANP32DO95626 131 aa13□□□□□ -0.33
MSH5-208ENST00000429846 TFPTP0C1Z6 253 aa13□□□□□ -0.33
MSH5-208ENST00000429846 GKN3PP0CG01 181 aa13□□□□□ -0.33
MSH5-208ENST00000429846 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
MSH5-208ENST00000429846 CRATP43155 626 aa13□□□□□ -0.33
MSH5-208ENST00000429846 P2RY4P51582 365 aa13□□□□□ -0.33
MSH5-208ENST00000429846 DSTNP60981 165 aa13□□□□□ -0.33
MSH5-208ENST00000429846 SWI5Q1ZZU3 235 aa13□□□□□ -0.33
MSH5-208ENST00000429846 C3orf36Q3SXR2 165 aa13□□□□□ -0.33
MSH5-208ENST00000429846 TBRG1Q3YBR2 411 aa13□□□□□ -0.33
MSH5-208ENST00000429846 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
MSH5-208ENST00000429846 HHATQ5VTY9 493 aa13□□□□□ -0.33
MSH5-208ENST00000429846 C1orf140Q5VVS0 124 aa13□□□□□ -0.33
MSH5-208ENST00000429846 PRAMEF8Q5VWM4 474 aa13□□□□□ -0.33
MSH5-208ENST00000429846 PRAMEF7Q5VXH5 474 aa13□□□□□ -0.33
MSH5-208ENST00000429846 CYB5R2Q6BCY4 276 aa13□□□□□ -0.33
MSH5-208ENST00000429846 VRK2Q86Y07 508 aa13□□□□□ -0.33
MSH5-208ENST00000429846 OR1K1Q8NGR3 316 aa13□□□□□ -0.33
MSH5-208ENST00000429846 STK35Q8TDR2 534 aa13□□□□□ -0.33
MSH5-208ENST00000429846 SLC35B4Q969S0 331 aa13□□□□□ -0.33
MSH5-208ENST00000429846 AURKBQ96GD4 344 aaPredicted RBP13□□□□□ -0.33
MSH5-208ENST00000429846 MAELQ96JY0 434 aaKnown RBP13□□□□□ -0.33
MSH5-208ENST00000429846 SLC38A2Q96QD8 506 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms