RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MERTKQ12866 999 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 MAB21L1Q13394 359 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 OLIG2Q13516 323 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 AQP6Q13520 282 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ALCAMQ13740 583 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 GK3PQ14409 553 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 GRB7Q14451 532 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 KIR2DS5Q14953 304 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 PIGGQ5H8A4 983 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ARHGAP17Q68EM7 881 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 XAF1Q6GPH4 301 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 RAB12Q6IQ22 244 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 MRNIPQ6NTE8 343 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 FBXL22Q6P050 247 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 P4HA3Q7Z4N8 544 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 DCXRQ7Z4W1 244 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 DPPA2Q7Z7J5 298 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 TPRA1Q86W33 373 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 PSTKQ8IV42 348 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 CPNE9Q8IYJ1 553 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 RDH10Q8IZV5 341 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 PGAM4Q8N0Y7 254 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF786Q8N393 782 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 C12orf45Q8N5I9 185 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 WDSUB1Q8N9V3 476 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 MFSD9Q8NBP5 474 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 NAXEQ8NCW5 288 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 BPIFB6Q8NFQ5 453 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 OR8J2Q8NGG1 315 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 OR6M1Q8NGM8 313 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 FAM57AQ8TBR7 257 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 Q8TCH9 128 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 PAQR8Q8TEZ7 354 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF501Q96CX3 271 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ASB9Q96DX5 294 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZBED6CLQ96FA7 236 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 WWC2-AS2Q96NR7 200 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 OR52B2Q96RD2 323 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF300Q96RE9 604 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 CPXM1Q96SM3 734 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZBTB18Q99592 522 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 TXN2Q99757 166 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 TTYH2Q9BSA4 534 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 STRA6Q9BX79 667 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 SEMA6AQ9H2E6 1030 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ASB8Q9H765 288 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 DDX31Q9H8H2 851 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 RNF122Q9H9V4 155 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 ZBTB26Q9HCK0 441 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 SPAG4Q9NPE6 437 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 AGPAT3Q9NRZ7 376 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 FAM120CQ9NX05 1096 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 MPP6Q9NZW5 540 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 SEMA5BQ9P283 1151 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 SCP2D1Q9UJQ7 156 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 NDRG4Q9ULP0 352 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC17A4Q9Y2C5 497 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 MRPS2Q9Y399 296 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 POLR3HQ9Y535 204 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 PEX16Q9Y5Y5 336 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 DYSFO75923 2080 aa4.99□□□□□ -1.61
ECHDC1-206ENST00000417628 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A1B0GVC2 190 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 EXOC1LA0A1B0GW35 172 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 A0A1W2PS29 197 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TCRBV3S1A0A5B6 114 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC22A23A1A5C7 686 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 A8MUA0 341 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 KCNU1A8MYU2 1149 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 DIRC3C9JPN6 131 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 NPIPB8E9PQR5 432 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 G3V2T6 193 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 BLOC1S5-TXNDC5H3BN57 136 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 I6L893 689 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 M0R3G1 203 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 MATN3O15232 486 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TCAPO15273 167 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PSMD3O43242 534 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 LIASO43766 372 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 KERAO60938 352 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 SNNO75324 88 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PRKRAO75569 313 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 POP7O75817 140 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 GSRP00390 522 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 F10P00742 488 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CHRNGP07510 517 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 UMODP07911 640 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 OGNP20774 298 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 COMTP21964 271 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PAICSP22234 425 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 EPHA3P29320 983 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 TACR3P29371 465 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PTH2RP49190 550 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 COMPP49747 757 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 CCR9P51686 369 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 PLA2G16P53816 162 aa4.98□□□□□ -1.61
ECHDC1-206ENST00000417628 YWHAZP63104 245 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms