RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 DEPDC4Q8N2C3 294 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 CADM2Q8N3J6 435 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 BBS10Q8TAM1 723 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 TRAF4Q9BUZ4 470 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-208ENST00000417285 NPAP1Q9NZP6 1156 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 DCTN4Q9UJW0 460 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 ZC3H12DA2A288 527 aaKnown RBP22.28■■□□□ 1.16
VEGFA-208ENST00000417285 LIPT2A6NK58 231 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 A8MVM7 634 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 NUDT7P0C024 238 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 PPIBP23284 216 aaKnown RBP22.28■■□□□ 1.16
VEGFA-208ENST00000417285 ATP4BP51164 291 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 CDH11P55287 796 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 CEACAM7Q14002 265 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 ZNF311Q5JNZ3 666 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 OTUD3Q5T2D3 398 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-208ENST00000417285 AGAP6Q5VW22 663 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 DTX2Q86UW9 622 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 CLIP4Q8N3C7 705 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 C1orf162Q8NEQ5 155 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-208ENST00000417285 OR52N5Q8NH56 324 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 MAL2Q969L2 176 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 TMEM45BQ96B21 275 aa22.28■■□□□ 1.16
VEGFA-208ENST00000417285 BARX1Q9HBU1 254 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-208ENST00000417285 PDLIM1O00151 329 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 CD8AP01732 235 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 PPP2R2BQ00005 443 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 SQLEQ14534 574 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 C17orf78Q8N4C9 275 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 CKAP2Q8WWK9 683 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 MAGEB18Q96M61 343 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 TAPBPLQ9BX59 468 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 AMBRA1Q9C0C7 1298 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 SLC25A37Q9NYZ2 338 aa22.27■■□□□ 1.16
VEGFA-208ENST00000417285 VAMP5O95183 116 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 ITGA5P08648 1049 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 CD40P25942 277 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 CDKN1AP38936 164 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 ZNF83P51522 516 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 VEZF1Q14119 521 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 OR7A5Q15622 319 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 AGKQ53H12 422 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 GCNT6Q5T4J0 391 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 TMEM225Q6GV28 225 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 MSRB3Q8IXL7 192 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 PIAS4Q8N2W9 510 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-208ENST00000417285 TMEM99Q8N816 258 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 OR52E4Q8NGH9 312 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 SLC35B4Q969S0 331 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 SLCO5A1Q9H2Y9 848 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 RABEP2Q9H5N1 569 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 SLC7A10Q9NS82 523 aa22.26■■□□□ 1.15
VEGFA-208ENST00000417285 AQP7P3A6NL99 342 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 AKR7A3O95154 331 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 PRG2P13727 222 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 PAGE3Q5JUK9 113 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 SLC22A25Q6T423 547 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 AAED1Q7RTV5 226 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 SERPINA11Q86U17 422 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 ZIC4Q8N9L1 334 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 POMGNT2Q8NAT1 580 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 OR9K2Q8NGE7 335 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 STON2Q8WXE9 905 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 HS6ST2Q96MM7 605 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 DHRS9Q9BPW9 319 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 SLC52A3Q9NQ40 469 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 SLAMF8Q9P0V8 285 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 POU2F3Q9UKI9 436 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 CORO2BQ9UQ03 480 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 AMDHD2Q9Y303 409 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 CHST2Q9Y4C5 530 aa22.25■■□□□ 1.15
VEGFA-208ENST00000417285 ARAFP10398 606 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 ETS2P15036 469 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 H2AFXP16104 143 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-208ENST00000417285 PCSK6P29122 969 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 MPGP29372 298 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 TTKP33981 857 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 NRF1Q16656 503 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 TSPO2Q5TGU0 170 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 ABHD12BQ7Z5M8 362 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-208ENST00000417285 WDR31Q8NA23 367 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 ADAD1Q96M93 576 aaKnown RBP22.24■■□□□ 1.15
VEGFA-208ENST00000417285 REG4Q9BYZ8 158 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 SLC17A5Q9NRA2 495 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 VAPAQ9P0L0 249 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 GMEB1Q9Y692 573 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 PLCE1Q9P212 2302 aa22.24■■□□□ 1.15
VEGFA-208ENST00000417285 IGHV4-39P01824 125 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 FOXG1P55316 489 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-208ENST00000417285 BNIP2Q12982 314 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 C1orf140Q5VVS0 124 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 KRT73Q86Y46 540 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 NFKBIDQ8NI38 313 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 STK35Q8TDR2 534 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 C3orf49Q96BT1 292 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 BOD1Q96IK1 185 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 SPATA5L1Q9BVQ7 753 aa22.23■■□□□ 1.15
VEGFA-208ENST00000417285 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-208ENST00000417285 A0A1W2PR80 420 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 OR6C65A6NJZ3 312 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms