RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 SEC23BQ15437 767 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 ZNF239Q16600 458 aaKnown RBP12.85□□□□□ -0.35
LIMS2-209ENST00000410038 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 NRMQ8IXM6 262 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 RNF113BQ8IZP6 322 aaKnown RBP12.85□□□□□ -0.35
LIMS2-209ENST00000410038 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 CALHM2Q9HA72 323 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
LIMS2-209ENST00000410038 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SLC22A20A6NK97 555 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
LIMS2-209ENST00000410038 HNRNPRO43390 633 aaKnown RBP12.84□□□□□ -0.35
LIMS2-209ENST00000410038 FZD7O75084 574 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SYNGR4O95473 234 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 TGM6O95932 706 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 IGF2P01344 180 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 BGLAPP02818 100 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 ENPP1P22413 925 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SLC35A1P78382 337 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 H3F3AP84243 136 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
LIMS2-209ENST00000410038 ZNF74Q16587 644 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 PPP4R4Q6NUP7 873 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 RRM2BQ7LG56 351 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 REEP1Q9H902 201 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 DNAJB9Q9UBS3 223 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
LIMS2-209ENST00000410038 U3KQV3 271 aa12.84□□□□□ -0.35
LIMS2-209ENST00000410038 NCOA6Q14686 2063 aaPredicted RBP12.83□□□□□ -0.35
LIMS2-209ENST00000410038 ZNF814B7Z6K7 855 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 E9PLN8 166 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 H3BNX3 289 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 GNGT2O14610 69 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 CLOCKO15516 846 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 EIF1BO60739 113 aaKnown RBP12.83□□□□□ -0.35
LIMS2-209ENST00000410038 AQP8O94778 261 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 CH25HO95992 272 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 CBLP22681 906 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 CTBP2P56545 445 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 PRKCDQ05655 676 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 ZFP1Q6P2D0 407 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 SLC46A3Q7Z3Q1 461 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 MARVELD2Q8N4S9 558 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 C10orf53Q8N6V4 93 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 OR4K5Q8NGD3 323 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 WNT2BQ93097 391 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 BPIFA2Q96DR5 249 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 ZHX1-C8orf76Q96EF9 292 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 DMRTA2Q96SC8 542 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 PRRG4Q9BZD6 226 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 SEC14L4Q9UDX3 406 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 TMCC3Q9ULS5 477 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 MEMO1Q9Y316 297 aa12.83□□□□□ -0.35
LIMS2-209ENST00000410038 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.35
LIMS2-209ENST00000410038 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 CCL21O00585 134 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 DEAF1O75398 565 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 TOXO94900 526 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 AKR7A3O95154 331 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MT-ATP6P00846 226 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 GLI4P10075 376 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 IFI30P13284 250 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 FASP25445 335 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 GRPRP30550 384 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 IST1P53990 364 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MFSD13AQ14CX5 517 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 NCCRP1Q6ZVX7 275 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 FCRLAQ7L513 359 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 FJX1Q86VR8 437 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 LRRC17Q8N6Y2 441 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 TMEM99Q8N816 258 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-209ENST00000410038 RNF128Q8TEB7 428 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 LRTOMTQ8WZ04 291 aa12.83□□□□□ -0.36
LIMS2-209ENST00000410038 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms