RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 DNAJC5GQ8N7S2 189 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 SGPP1Q9BX95 441 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 MED9Q9NWA0 146 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 POP7O75817 140 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 FGF7P21781 194 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 EOGTQ5NDL2 527 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 OR5K2Q8NHB8 316 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 PLK3Q9H4B4 646 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 SCML1Q9UN30 329 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 UBL3O95164 117 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 OR13C7P0DN81 318 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 SORBS2O94875 1100 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 DBHP09172 617 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 POLR2CP19387 275 aaPredicted RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 SRMP19623 302 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 C15orf52Q6ZUT6 534 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 NDRG1Q92597 394 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 FAM71F1Q96KD3 344 aaPredicted RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 FBXL2Q9UKC9 423 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
USP49-203ENST00000394253 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
USP49-203ENST00000394253 BET1O15155 118 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ACOT6Q3I5F7 207 aaPredicted RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 ZNF573Q86YE8 665 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 K7ERU9 68 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 BMPR1BO00238 502 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 BMPR1AP36894 532 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 PPP1CBP62140 327 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 DMWDQ09019 674 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR5I1Q13606 314 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 HTR4Q13639 388 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 NSDHLQ15738 373 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 THEM4Q5T1C6 240 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 PIGQQ9BRB3 760 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 SPATA31C1P0DKV0 1188 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 TACR1P25103 407 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 PKDCCQ504Y2 493 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ATG101Q9BSB4 218 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 NGBQ9NPG2 151 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 RIPK3Q9Y572 518 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 DCTN6O00399 190 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 AHSGP02765 367 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 TAS2R38P59533 333 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 NRMQ8IXM6 262 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 LINC00597Q9H2U6 94 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 A6NDN8 102 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 E5RGE8 158 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 LGALS8O00214 317 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR2F2O95006 317 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 NME1P15531 152 aaKnown RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 PTAFRP25105 342 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ETV3P41162 512 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 KCNQ1P51787 676 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 ZNF91Q05481 1191 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR2F1Q13607 317 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 WDR74Q6RFH5 385 aaPredicted RBP12.57□□□□□ -0.4
USP49-203ENST00000394253 NKAIN3Q8N8D7 197 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 GPR26Q8NDV2 337 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR13C4Q8NGS5 318 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SECTM1Q8WVN6 248 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR5B2Q96R09 309 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 FBXO34Q9NWN3 711 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 DUX1O43812 170 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 EOMESO95936 686 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR4D2P58180 307 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 GPLD1P80108 840 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ENPP4Q9Y6X5 453 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ARNTP27540 789 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 DUSP1P28562 367 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 RFX2P48378 723 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 ZNF684Q5T5D7 378 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 SUSD1Q6UWL2 747 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 TCTEX1D1Q8N7M0 179 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 OR52N2Q8NGI0 321 aa12.57□□□□□ -0.4
USP49-203ENST00000394253 IMP4Q96G21 291 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms