RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PNMTP11086 282 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 SFTPDP35247 375 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 SIRPAP78324 504 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 ADAM8P78325 824 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 MAMDC2Q7Z304 686 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-202ENST00000358771 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 NUDT22Q9BRQ3 303 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 SLC6A5Q9Y345 797 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 A0A087WV62 115 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 HSD11B2P80365 405 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 OC90Q02509 493 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-202ENST00000358771 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 GPBAR1Q8TDU6 330 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 MR1Q95460 341 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 S100A13Q99584 98 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 HOXD1Q9GZZ0 328 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 KLHL21Q9UJP4 597 aa13.09□□□□□ -0.31
SIRPA-202ENST00000358771 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-202ENST00000358771 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 CBX7O95931 251 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 BTBD16Q32M84 506 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 SLC22A18ASQ8N1D0 253 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 NAXEQ8NCW5 288 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.31
SIRPA-202ENST00000358771 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 CRB3Q9BUF7 120 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 DIABLOQ9NR28 239 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 SDHAF3Q9NRP4 125 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 RARRES3Q9UL19 164 aa13.08□□□□□ -0.31
SIRPA-202ENST00000358771 TRAM1Q15629 374 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 TMED4Q7Z7H5 227 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 FYTTD1Q96QD9 318 aaKnown RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 ULBP3Q9BZM4 244 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 SIAEQ9HAT2 523 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 NSA2O95478 260 aaKnown RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 GIFP27352 417 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 PRKXP51817 358 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 HSD17B7P56937 341 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 AP3S2P59780 193 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 C14orf28Q4W4Y0 310 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 QSOX2Q6ZRP7 698 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 PRSS45Q7RTY3 260 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 ATCAYQ86WG3 371 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 OR4M1Q8NGD0 313 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-202ENST00000358771 BARHL1Q9BZE3 327 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 SIGLEC7Q9Y286 467 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
SIRPA-202ENST00000358771 A0A1W2PPL8 197 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 E9PI62 339 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 FZD7O75084 574 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 KLK3P07288 261 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 GSTT2P0CG29 244 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 GSTT2BP0CG30 244 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 ELK1P19419 428 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 MAGEB1P43366 347 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 LIMS1P48059 325 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SLC6A9P48067 706 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 OR7A5Q15622 319 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 CBLN3Q6UW01 205 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 FCRLAQ7L513 359 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SETD6Q8TBK2 473 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 TMEM234Q8WY98 164 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 CTRCQ99895 268 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 PLEKHA1Q9HB21 404 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 FGF20Q9NP95 211 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 NOX4Q9NPH5 578 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 PPP4R1LQ9P1A2 415 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 RIF1Q5UIP0 2472 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 FRKP42685 505 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 MELKQ14680 651 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SLC6A19Q695T7 634 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 C16orf47Q6ZP98 133 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 CCDC190Q86UF4 302 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SLC35B4Q969S0 331 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 C10orf90Q96M02 699 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 OR10A4Q9H209 315 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 EMP2P54851 167 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms