RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 WFDC6Q9BQY6 131 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 TRIM2Q9C040 744 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 PIF1Q9H611 641 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 TESQ9UGI8 421 aaKnown RBP12.91□□□□□ -0.34
ERCC1-203ENST00000340192 SLC13A4Q9UKG4 626 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 SLC9A8Q9Y2E8 581 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 ITPR3Q14573 2671 aa12.91□□□□□ -0.34
ERCC1-203ENST00000340192 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 FXYD1O00168 92 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 KRT34O76011 436 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 AHSA1O95433 338 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 NPPAP01160 153 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 PNMTP11086 282 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 CD53P19397 219 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 RPS5P46782 204 aaKnown RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 GZMMP51124 257 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 P2RY4P51582 365 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 NR1H2P55055 460 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 STK11Q15831 433 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ALG10BQ5I7T1 473 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ULK3Q6PHR2 472 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 GPAT4Q86UL3 456 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 OR9K2Q8NGE7 335 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 MFSD8Q8NHS3 518 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
ERCC1-203ENST00000340192 UBTD1Q9HAC8 227 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 C12orf10Q9HB07 376 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ASB6Q9NWX5 421 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ARMCX1Q9P291 453 aa12.9□□□□□ -0.34
ERCC1-203ENST00000340192 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TEP1Q99973 2627 aaKnown RBP12.89□□□□□ -0.35
ERCC1-203ENST00000340192 FTCDNL1E5RQL4 147 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 M0QX08 132 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TPST2O60704 377 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 LGI1O95970 557 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 GGT1P19440 569 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 FAPQ12884 760 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 OR1Q1Q15612 314 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 ACKR1Q16570 336 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 DUSP7Q16829 419 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 VMACQ2NL98 169 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 FAM91A1Q658Y4 838 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 PATL1Q86TB9 770 aaKnown RBP12.89□□□□□ -0.35
ERCC1-203ENST00000340192 RANBP3LQ86VV4 465 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-203ENST00000340192 ZIC4Q8N9L1 334 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 GPR32P1Q8NGA4 272 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 SLC38A4Q969I6 547 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TMEM45BQ96B21 275 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 SLC25A36Q96CQ1 311 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
ERCC1-203ENST00000340192 ARHGDIGQ99819 225 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 ECSITQ9BQ95 431 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 EVA1AQ9H8M9 152 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 TMEM27Q9HBJ8 222 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 MALT1Q9UDY8 824 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 CAPN7Q9Y6W3 813 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 F8P00451 2351 aa12.89□□□□□ -0.35
ERCC1-203ENST00000340192 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
ERCC1-203ENST00000340192 IGKV1D-42A0A075B6H8 117 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 A0A0B4J2E0 115 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 A0A1B0GX12 115 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 CCT8L1PA6NM43 557 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 M0R3H8 397 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SLC22A2O15244 555 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 RAD51DO75771 328 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 PLAUP00749 431 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 C8BP07358 591 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 PPA1Q15181 289 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 NRF1Q16656 503 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 TIMM23BQ5SRD1 257 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 INTS11Q5TA45 600 aaKnown RBP12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SEZ6L2Q6UXD5 910 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-203ENST00000340192 CALHM3Q86XJ0 350 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 PCYOX1LQ8NBM8 494 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 RNF217Q8TC41 542 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 TAMM41Q96BW9 452 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SLC47A1Q96FL8 570 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 NGBQ9NPG2 151 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SLC7A10Q9NS82 523 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 GID8Q9NWU2 228 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 TAS2R16Q9NYV7 291 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SELENONQ9NZV5 590 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 SEC14L4Q9UDX3 406 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
ERCC1-203ENST00000340192 DSCAMO60469 2012 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms