RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 BABAM2Q9NXR7 383 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 BTNL2Q9UIR0 455 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ACP2P11117 423 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 LIPCP11150 499 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 CBR1P16152 277 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 C5AR1P21730 350 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 OLIG2Q13516 323 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 GRAMD2AQ8IUY3 354 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SLCO5A1Q9H2Y9 848 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ERVMER34-1Q9H9K5 563 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 PTGDR2Q9Y5Y4 395 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM269A0A1B0GVZ9 245 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 KDM4FA0A1W2PPD8 638 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 YY2O15391 372 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 HNRNPA1P09651 372 aaKnown RBP eCLIP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FUT1P19526 365 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 NME2P22392 152 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SLC14A2Q15849 920 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 VASNQ6EMK4 673 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF852Q6ZMS4 543 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF574Q6ZN55 896 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 BPIFB2Q8N4F0 458 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 RAB3CQ96E17 227 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 UNC50Q53HI1 259 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 HBMQ6B0K9 141 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 OR9Q2Q8NGE9 314 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM239Q8WW34 195 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SCLYQ96I15 445 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FAM234AQ9H0X4 552 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 PCDHGA1Q9Y5H4 931 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 CD46P15529 392 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 AMTP48728 403 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF91Q05481 1191 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ACSM1Q08AH1 577 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 DEFB132Q7Z7B7 95 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ALOXE3Q9BYJ1 711 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SEMA4GQ9NTN9 838 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 B3GAT1Q9P2W7 334 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 DOCK9Q9BZ29 2069 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FGF18O76093 207 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SOD2P04179 222 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 GABRA5P31644 462 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 MTCP1P56278 107 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 WDR88Q6ZMY6 472 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM163Q8TC26 289 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 C8orf33Q9H7E9 229 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 DUSP22Q9NRW4 184 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 PGAP2Q9UHJ9 254 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FAM171A2A8MVW0 826 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF587BE7ETH6 402 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SOCS6O14544 535 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 XRCC3O43542 346 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 PPP1R11O60927 126 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ITGB8P26012 769 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 HOXA11P31270 313 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 FIGLAQ6QHK4 219 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF765Q7L2R6 523 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 OR7G3Q8NG95 312 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 NPY6RQ99463 290 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ZFYVE21Q9BQ24 234 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 A0A0B4J2A0 478 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SMIM17P0DL12 118 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 IL4RP24394 825 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TGM4P49221 684 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 BPIFB3P59826 476 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CXCR4P61073 352 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SEC22CQ9BRL7 303 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SHPKQ9UHJ6 478 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ZDBF2Q9HCK1 2354 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 A0A0J9YY10 115 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PPP5D1E7EU14 171 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 GPRIN2O60269 458 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CDKN2DP55273 166 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 FAM182AQ5T1J6 154 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 MOB3CQ70IA8 216 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 NDUFAF7Q7L592 441 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PQLC3Q8N755 202 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 C14orf79Q96F83 325 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ARHGAP39Q9C0H5 1083 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SPHK2Q9NRA0 654 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PRICKLE3O43900 615 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ADAM23O75077 832 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 HES1Q14469 280 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 RGNQ15493 299 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 C5orf46Q6UWT4 87 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OVCH1Q7RTY7 1134 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35D1Q9NTN3 355 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OPRD1P41143 372 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 GPR18Q14330 331 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OR6V1Q8N148 313 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OR14A16Q8NHC5 309 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 DUSP19Q8WTR2 217 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms