RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
PHGDH-213ENST00000641272 DBF4Q9UBU7 674 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-213ENST00000641272 TRPM7Q96QT4 1865 aa21.71■■□□□ 1.07
PHGDH-213ENST00000641272 VEGFBP49765 207 aa21.71■■□□□ 1.07
PHGDH-213ENST00000641272 ANKRD13DQ6ZTN6 518 aa21.71■■□□□ 1.07
PHGDH-213ENST00000641272 MPNDQ8N594 471 aa21.71■■□□□ 1.07
PHGDH-213ENST00000641272 SUPT20HQ8NEM7 779 aa21.71■■□□□ 1.07
PHGDH-213ENST00000641272 ELL2O00472 640 aaPredicted RBP21.7■■□□□ 1.06
PHGDH-213ENST00000641272 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
PHGDH-213ENST00000641272 ISCA1Q9BUE6 129 aa21.7■■□□□ 1.06
PHGDH-213ENST00000641272 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
PHGDH-213ENST00000641272 ABT1Q9ULW3 272 aaKnown RBP21.7■■□□□ 1.06
PHGDH-213ENST00000641272 FOXN1O15353 648 aa21.69■■□□□ 1.06
PHGDH-213ENST00000641272 BBOX1O75936 387 aa21.69■■□□□ 1.06
PHGDH-213ENST00000641272 CXCL9Q07325 125 aa21.69■■□□□ 1.06
PHGDH-213ENST00000641272 ZNRF3Q9ULT6 936 aa21.69■■□□□ 1.06
PHGDH-213ENST00000641272 TRAF5O00463 557 aa21.68■■□□□ 1.06
PHGDH-213ENST00000641272 RAD17O75943 681 aa21.68■■□□□ 1.06
PHGDH-213ENST00000641272 GMPSP49915 693 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-213ENST00000641272 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
PHGDH-213ENST00000641272 CELF1Q92879 486 aaKnown RBP21.68■■□□□ 1.06
PHGDH-213ENST00000641272 HYPKQ9NX55 129 aa21.68■■□□□ 1.06
PHGDH-213ENST00000641272 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
PHGDH-213ENST00000641272 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
PHGDH-213ENST00000641272 IFT57Q9NWB7 429 aa21.67■■□□□ 1.06
PHGDH-213ENST00000641272 GPRC5DQ9NZD1 345 aa21.67■■□□□ 1.06
PHGDH-213ENST00000641272 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
PHGDH-213ENST00000641272 GOLGA2Q08379 1002 aa21.66■■□□□ 1.06
PHGDH-213ENST00000641272 CIAPIN1Q6FI81 312 aa21.66■■□□□ 1.06
PHGDH-213ENST00000641272 PAXIP1Q6ZW49 1069 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-213ENST00000641272 USP50Q70EL3 339 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-213ENST00000641272 GRM1Q13255 1194 aa21.65■■□□□ 1.06
PHGDH-213ENST00000641272 RIC3Q7Z5B4 369 aa21.65■■□□□ 1.06
PHGDH-213ENST00000641272 ADARB2Q9NS39 739 aaKnown RBP21.65■■□□□ 1.06
PHGDH-213ENST00000641272 SHTN1A0MZ66 631 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 RASSF10A6NK89 507 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 YDJCA8MPS7 323 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 GNAI1P63096 354 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 GPR101Q96P66 508 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-213ENST00000641272 MYD88Q99836 296 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 VPS33BQ9H267 617 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 SPEF2Q9C093 1822 aa21.64■■□□□ 1.05
PHGDH-213ENST00000641272 IRS4O14654 1257 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-213ENST00000641272 DEFB115Q30KQ5 88 aa21.63■■□□□ 1.05
PHGDH-213ENST00000641272 C8orf58Q8NAV2 365 aa21.63■■□□□ 1.05
PHGDH-213ENST00000641272 TRPM4Q8TD43 1214 aa21.63■■□□□ 1.05
PHGDH-213ENST00000641272 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
PHGDH-213ENST00000641272 DBNDD1Q9H9R9 158 aa21.63■■□□□ 1.05
PHGDH-213ENST00000641272 NSFL1CQ9UNZ2 370 aaKnown RBP21.63■■□□□ 1.05
PHGDH-213ENST00000641272 RIMBP2O15034 1052 aa21.62■■□□□ 1.05
PHGDH-213ENST00000641272 SF3B3Q15393 1217 aaKnown RBP21.62■■□□□ 1.05
PHGDH-213ENST00000641272 CCDC184Q52MB2 194 aa21.62■■□□□ 1.05
PHGDH-213ENST00000641272 TMC4Q7Z404 712 aa21.62■■□□□ 1.05
PHGDH-213ENST00000641272 JARID2Q92833 1246 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-213ENST00000641272 WDR33Q9C0J8 1336 aaKnown RBP21.61■■□□□ 1.05
PHGDH-213ENST00000641272 GPSM2P81274 684 aa21.61■■□□□ 1.05
PHGDH-213ENST00000641272 CALD1Q05682 793 aaKnown RBP21.61■■□□□ 1.05
PHGDH-213ENST00000641272 CCDC85AQ96PX6 553 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-213ENST00000641272 C6orf229H3BNL8 230 aa21.6■■□□□ 1.05
PHGDH-213ENST00000641272 TSR2Q969E8 191 aaKnown RBP21.6■■□□□ 1.05
PHGDH-213ENST00000641272 GLIS2Q9BZE0 524 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-213ENST00000641272 ZBTB12Q9Y330 459 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-213ENST00000641272 SCN9AQ15858 1988 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 CDHR2Q9BYE9 1310 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 TNIP1Q15025 636 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 CYP4F22Q6NT55 531 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 ZNF408Q9H9D4 720 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 SEC31BQ9NQW1 1179 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 POLLQ9UGP5 575 aa21.59■■□□□ 1.05
PHGDH-213ENST00000641272 CTCFP49711 727 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-213ENST00000641272 CST9Q5W186 159 aa21.58■■□□□ 1.05
PHGDH-213ENST00000641272 MICALL2Q8IY33 904 aa21.58■■□□□ 1.05
PHGDH-213ENST00000641272 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-213ENST00000641272 WBP1LQ9NX94 342 aa21.58■■□□□ 1.05
PHGDH-213ENST00000641272 MYH3P11055 1940 aa21.57■■□□□ 1.04
PHGDH-213ENST00000641272 PSMD14O00487 310 aa21.57■■□□□ 1.04
PHGDH-213ENST00000641272 ECE2O60344 883 aa21.57■■□□□ 1.04
PHGDH-213ENST00000641272 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
PHGDH-213ENST00000641272 TRIM28Q13263 835 aaKnown RBP21.57■■□□□ 1.04
PHGDH-213ENST00000641272 DOK7Q18PE1 504 aa21.57■■□□□ 1.04
PHGDH-213ENST00000641272 CAPNS2Q96L46 248 aa21.57■■□□□ 1.04
PHGDH-213ENST00000641272 CELF2O95319 508 aaKnown RBP21.56■■□□□ 1.04
PHGDH-213ENST00000641272 LBX1P52954 281 aa21.56■■□□□ 1.04
PHGDH-213ENST00000641272 CNOT7Q9UIV1 285 aaKnown RBP21.56■■□□□ 1.04
PHGDH-213ENST00000641272 RTL9Q8NET4 1388 aa21.56■■□□□ 1.04
PHGDH-213ENST00000641272 RPS8P62241 208 aaKnown RBP21.55■■□□□ 1.04
PHGDH-213ENST00000641272 CCDC30Q5VVM6 783 aa21.55■■□□□ 1.04
PHGDH-213ENST00000641272 KCNQ5Q9NR82 932 aa21.55■■□□□ 1.04
PHGDH-213ENST00000641272 CWC25Q9NXE8 425 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-213ENST00000641272 TLL2Q9Y6L7 1015 aa21.55■■□□□ 1.04
PHGDH-213ENST00000641272 UFL1O94874 794 aa21.54■■□□□ 1.04
PHGDH-213ENST00000641272 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-213ENST00000641272 HSPA8P11142 646 aaKnown RBP21.54■■□□□ 1.04
PHGDH-213ENST00000641272 TBC1D10BQ4KMP7 808 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-213ENST00000641272 DLK2Q6UY11 383 aa21.54■■□□□ 1.04
PHGDH-213ENST00000641272 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
PHGDH-213ENST00000641272 EYA3Q99504 573 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms