RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 EPS15P42566 896 aa20.74■□□□□ 0.91
SGMS1-209ENST00000609445 SCNN1DP51172 638 aa20.74■□□□□ 0.91
SGMS1-209ENST00000609445 MAP1SQ66K74 1059 aaPredicted RBP20.74■□□□□ 0.91
SGMS1-209ENST00000609445 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
SGMS1-209ENST00000609445 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
SGMS1-209ENST00000609445 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
SGMS1-209ENST00000609445 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
SGMS1-209ENST00000609445 LMOD1P29536 600 aaPredicted RBP20.72■□□□□ 0.91
SGMS1-209ENST00000609445 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
SGMS1-209ENST00000609445 RIC3Q7Z5B4 369 aa20.72■□□□□ 0.91
SGMS1-209ENST00000609445 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
SGMS1-209ENST00000609445 HSPA1AP0DMV8 641 aaKnown RBP20.71■□□□□ 0.91
SGMS1-209ENST00000609445 HSPA1BP0DMV9 641 aaKnown RBP20.71■□□□□ 0.91
SGMS1-209ENST00000609445 TRIM28Q13263 835 aaKnown RBP20.71■□□□□ 0.91
SGMS1-209ENST00000609445 COL13A1Q5TAT6 717 aaPredicted RBP20.71■□□□□ 0.91
SGMS1-209ENST00000609445 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
SGMS1-209ENST00000609445 CELF1Q92879 486 aaKnown RBP20.71■□□□□ 0.91
SGMS1-209ENST00000609445 VPS33BQ9H267 617 aa20.71■□□□□ 0.91
SGMS1-209ENST00000609445 ZNRF3Q9ULT6 936 aa20.71■□□□□ 0.91
SGMS1-209ENST00000609445 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
SGMS1-209ENST00000609445 CXCL9Q07325 125 aa20.7■□□□□ 0.9
SGMS1-209ENST00000609445 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
SGMS1-209ENST00000609445 TSPYL6Q8N831 410 aa20.7■□□□□ 0.9
SGMS1-209ENST00000609445 TMEM88BA6NKF7 163 aa20.69■□□□□ 0.9
SGMS1-209ENST00000609445 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
SGMS1-209ENST00000609445 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
SGMS1-209ENST00000609445 MYD88Q99836 296 aa20.69■□□□□ 0.9
SGMS1-209ENST00000609445 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
SGMS1-209ENST00000609445 FMR1Q06787 632 aaKnown RBP eCLIP20.68■□□□□ 0.92e-16■■■■■ 102.3
SGMS1-209ENST00000609445 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-209ENST00000609445 RAD17O75943 681 aa20.67■□□□□ 0.9
SGMS1-209ENST00000609445 TMC4Q7Z404 712 aa20.67■□□□□ 0.9
SGMS1-209ENST00000609445 GMPSP49915 693 aaPredicted RBP20.66■□□□□ 0.9
SGMS1-209ENST00000609445 CCDC30Q5VVM6 783 aa20.66■□□□□ 0.9
SGMS1-209ENST00000609445 ZBTB38Q8NAP3 1195 aaPredicted RBP20.66■□□□□ 0.9
SGMS1-209ENST00000609445 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
SGMS1-209ENST00000609445 YDJCA8MPS7 323 aa20.65■□□□□ 0.9
SGMS1-209ENST00000609445 GPSM2P81274 684 aa20.65■□□□□ 0.9
SGMS1-209ENST00000609445 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
SGMS1-209ENST00000609445 USP50Q70EL3 339 aaPredicted RBP20.65■□□□□ 0.9
SGMS1-209ENST00000609445 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
SGMS1-209ENST00000609445 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
SGMS1-209ENST00000609445 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
SGMS1-209ENST00000609445 VEGFBP49765 207 aa20.64■□□□□ 0.89
SGMS1-209ENST00000609445 CCDC191Q8NCU4 936 aa20.64■□□□□ 0.89
SGMS1-209ENST00000609445 METTL22Q9BUU2 404 aaPredicted RBP20.64■□□□□ 0.89
SGMS1-209ENST00000609445 ADARB2Q9NS39 739 aaKnown RBP20.64■□□□□ 0.89
SGMS1-209ENST00000609445 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.89
SGMS1-209ENST00000609445 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
SGMS1-209ENST00000609445 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
SGMS1-209ENST00000609445 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
SGMS1-209ENST00000609445 GPR101Q96P66 508 aaPredicted RBP20.63■□□□□ 0.89
SGMS1-209ENST00000609445 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
SGMS1-209ENST00000609445 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
SGMS1-209ENST00000609445 POLLQ9UGP5 575 aa20.63■□□□□ 0.89
SGMS1-209ENST00000609445 MAP3K2Q9Y2U5 619 aa20.63■□□□□ 0.89
SGMS1-209ENST00000609445 SHTN1A0MZ66 631 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 TRAF5O00463 557 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 RIMBP2O15034 1052 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
SGMS1-209ENST00000609445 PCCAP05165 728 aaPredicted RBP20.62■□□□□ 0.89
SGMS1-209ENST00000609445 TNIP1Q15025 636 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 WASHC4Q2M389 1173 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 CCDC85AQ96PX6 553 aaPredicted RBP20.62■□□□□ 0.89
SGMS1-209ENST00000609445 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 DBNDD1Q9H9R9 158 aa20.62■□□□□ 0.89
SGMS1-209ENST00000609445 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
SGMS1-209ENST00000609445 ABT1Q9ULW3 272 aaKnown RBP20.61■□□□□ 0.89
SGMS1-209ENST00000609445 PI4KAP2A4QPH2 592 aa20.6■□□□□ 0.89
SGMS1-209ENST00000609445 PDE8AO60658 829 aa20.6■□□□□ 0.89
SGMS1-209ENST00000609445 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
SGMS1-209ENST00000609445 G2E3Q7L622 706 aa20.6■□□□□ 0.89
SGMS1-209ENST00000609445 PI4KAP1Q8N8J0 262 aa20.6■□□□□ 0.89
SGMS1-209ENST00000609445 TRPM4Q8TD43 1214 aa20.6■□□□□ 0.89
SGMS1-209ENST00000609445 RASSF10A6NK89 507 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 HIRAP54198 1017 aaPredicted RBP20.59■□□□□ 0.89
SGMS1-209ENST00000609445 DOK7Q18PE1 504 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 DEFB115Q30KQ5 88 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 KSR2Q6VAB6 950 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 TBC1D16Q8TBP0 767 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 KCNQ5Q9NR82 932 aa20.59■□□□□ 0.89
SGMS1-209ENST00000609445 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
SGMS1-209ENST00000609445 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
SGMS1-209ENST00000609445 CDHR2Q9BYE9 1310 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 SCN9AQ15858 1988 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 PSMD14O00487 310 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 FOXN1O15353 648 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 ANP32CO43423 234 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 HSP90B1P14625 803 aaKnown RBP20.58■□□□□ 0.89
SGMS1-209ENST00000609445 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
SGMS1-209ENST00000609445 CNOT7Q9UIV1 285 aaKnown RBP20.58■□□□□ 0.89
SGMS1-209ENST00000609445 MYH3P11055 1940 aa20.58■□□□□ 0.88
SGMS1-209ENST00000609445 SPEF2Q9C093 1822 aa20.57■□□□□ 0.88
SGMS1-209ENST00000609445 IL16Q14005 1332 aa20.57■□□□□ 0.88
SGMS1-209ENST00000609445 ECE2O60344 883 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms