RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.17
CTCFL-217ENST00000608425 AK7Q96M32 723 aa13.96□□□□□ -0.17
CTCFL-217ENST00000608425 ZSCAN16Q9H4T2 348 aaPredicted RBP13.96□□□□□ -0.17
CTCFL-217ENST00000608425 CCDC171Q6TFL3 1326 aa13.96□□□□□ -0.17
CTCFL-217ENST00000608425 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.18
CTCFL-217ENST00000608425 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.18
CTCFL-217ENST00000608425 CCAR2Q8N163 923 aaKnown RBP13.96□□□□□ -0.18
CTCFL-217ENST00000608425 USP16Q9Y5T5 823 aa13.96□□□□□ -0.18
CTCFL-217ENST00000608425 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
CTCFL-217ENST00000608425 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
CTCFL-217ENST00000608425 WDR33Q9C0J8 1336 aaKnown RBP13.95□□□□□ -0.18
CTCFL-217ENST00000608425 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-217ENST00000608425 MAP9Q49MG5 647 aa13.95□□□□□ -0.18
CTCFL-217ENST00000608425 KAT2BQ92831 832 aa13.95□□□□□ -0.18
CTCFL-217ENST00000608425 SRRTQ9BXP5 876 aaKnown RBP13.95□□□□□ -0.18
CTCFL-217ENST00000608425 CORO7P57737 925 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
CTCFL-217ENST00000608425 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
CTCFL-217ENST00000608425 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■□□□ 12.1
CTCFL-217ENST00000608425 MARF1Q9Y4F3 1742 aaKnown RBP13.94□□□□□ -0.18
CTCFL-217ENST00000608425 MNAT1P51948 309 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 GNAI1P63096 354 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 NBPF6Q5VWK0 638 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 MICALL1Q8N3F8 863 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 IQUBQ8NA54 791 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 NBPF4Q96M43 638 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 L2HGDHQ9H9P8 463 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 CCDC93Q567U6 631 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 LEKR1Q6ZMV7 388 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 MNS1Q8NEH6 495 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 UBXN4Q92575 508 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 EXOC4Q96A65 974 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
CTCFL-217ENST00000608425 SETD1BQ9UPS6 1966 aaKnown RBP13.93□□□□□ -0.18
CTCFL-217ENST00000608425 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
CTCFL-217ENST00000608425 LIG1P18858 919 aa13.93□□□□□ -0.18
CTCFL-217ENST00000608425 CCZ1BP86790 482 aa13.93□□□□□ -0.18
CTCFL-217ENST00000608425 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
CTCFL-217ENST00000608425 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
CTCFL-217ENST00000608425 IPO8O15397 1037 aaKnown RBP13.93□□□□□ -0.18
CTCFL-217ENST00000608425 INHBEP58166 350 aa13.93□□□□□ -0.18
CTCFL-217ENST00000608425 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
CTCFL-217ENST00000608425 VPS18Q9P253 973 aa13.92□□□□□ -0.18
CTCFL-217ENST00000608425 SNW1Q13573 536 aaKnown RBP13.92□□□□□ -0.18
CTCFL-217ENST00000608425 DNAAF4Q8WXU2 420 aa13.92□□□□□ -0.18
CTCFL-217ENST00000608425 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
CTCFL-217ENST00000608425 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
CTCFL-217ENST00000608425 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
CTCFL-217ENST00000608425 PPP1R12AO14974 1030 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 ISM2Q6H9L7 571 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 CC2D1AQ6P1N0 951 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 FLT4P35916 1363 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 A0A087WWV3 80 aa13.91□□□□□ -0.18
CTCFL-217ENST00000608425 N4BP1O75113 896 aaKnown RBP13.91□□□□□ -0.18
CTCFL-217ENST00000608425 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 FBXW10Q5XX13 1052 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
CTCFL-217ENST00000608425 CARD6Q9BX69 1037 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 ERC2O15083 957 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
CTCFL-217ENST00000608425 FANCGO15287 622 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 IVLP07476 585 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 KCNA6P17658 529 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 SYT1P21579 422 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 KCNV1Q6PIU1 500 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 KDRP35968 1356 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
CTCFL-217ENST00000608425 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
CTCFL-217ENST00000608425 MCCP23508 829 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 LIG3P49916 1009 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
CTCFL-217ENST00000608425 TSHZ3Q63HK5 1081 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 E4F1Q66K89 784 aaPredicted RBP13.89□□□□□ -0.19
CTCFL-217ENST00000608425 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
CTCFL-217ENST00000608425 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 FUT8Q9BYC5 575 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
CTCFL-217ENST00000608425 PAX7P23759 505 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 ZNF165P49910 485 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 TADA2BQ86TJ2 420 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 NGDNQ8NEJ9 315 aaKnown RBP13.88□□□□□ -0.19
CTCFL-217ENST00000608425 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 VAMP4O75379 141 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
CTCFL-217ENST00000608425 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
CTCFL-217ENST00000608425 F13A1P00488 732 aa13.87□□□□□ -0.19
CTCFL-217ENST00000608425 HNRNPH1P31943 449 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms