RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SP8Q8IXZ3 490 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
IRF3-223ENST00000599223 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 GPRC5DQ9NZD1 345 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 BBOX1O75936 387 aa19.13■□□□□ 0.65
IRF3-223ENST00000599223 KIAA2012Q0VF49 1180 aa19.13■□□□□ 0.65
IRF3-223ENST00000599223 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
IRF3-223ENST00000599223 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
IRF3-223ENST00000599223 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
IRF3-223ENST00000599223 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
IRF3-223ENST00000599223 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
IRF3-223ENST00000599223 YDJCA8MPS7 323 aa19.12■□□□□ 0.65
IRF3-223ENST00000599223 GMPSP49915 693 aaPredicted RBP19.12■□□□□ 0.65
IRF3-223ENST00000599223 USP50Q70EL3 339 aaPredicted RBP19.12■□□□□ 0.65
IRF3-223ENST00000599223 MPNDQ8N594 471 aa19.12■□□□□ 0.65
IRF3-223ENST00000599223 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
IRF3-223ENST00000599223 DBF4Q9UBU7 674 aaPredicted RBP19.12■□□□□ 0.65
IRF3-223ENST00000599223 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
IRF3-223ENST00000599223 SHTN1A0MZ66 631 aa19.11■□□□□ 0.65
IRF3-223ENST00000599223 ZNF853P0CG23 659 aa19.11■□□□□ 0.65
IRF3-223ENST00000599223 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
IRF3-223ENST00000599223 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
IRF3-223ENST00000599223 CELF1Q92879 486 aaKnown RBP19.11■□□□□ 0.65
IRF3-223ENST00000599223 TMX4Q9H1E5 349 aaPredicted RBP19.11■□□□□ 0.65
IRF3-223ENST00000599223 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
IRF3-223ENST00000599223 ABT1Q9ULW3 272 aaKnown RBP19.11■□□□□ 0.65
IRF3-223ENST00000599223 RAD17O75943 681 aa19.1■□□□□ 0.65
IRF3-223ENST00000599223 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
IRF3-223ENST00000599223 CST9Q5W186 159 aa19.1■□□□□ 0.65
IRF3-223ENST00000599223 ADARB2Q9NS39 739 aaKnown RBP19.1■□□□□ 0.65
IRF3-223ENST00000599223 WBP1LQ9NX94 342 aa19.1■□□□□ 0.65
IRF3-223ENST00000599223 APAF1O14727 1248 aa19.09■□□□□ 0.65
IRF3-223ENST00000599223 DEFB115Q30KQ5 88 aa19.09■□□□□ 0.65
IRF3-223ENST00000599223 WDR33Q9C0J8 1336 aaKnown RBP19.08■□□□□ 0.65
IRF3-223ENST00000599223 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.64
IRF3-223ENST00000599223 CIAPIN1Q6FI81 312 aa19.08■□□□□ 0.64
IRF3-223ENST00000599223 TRPM4Q8TD43 1214 aa19.08■□□□□ 0.64
IRF3-223ENST00000599223 HYPKQ9NX55 129 aa19.08■□□□□ 0.64
IRF3-223ENST00000599223 CDHR2Q9BYE9 1310 aa19.07■□□□□ 0.64
IRF3-223ENST00000599223 HIRAP54198 1017 aaPredicted RBP19.07■□□□□ 0.64
IRF3-223ENST00000599223 PHAXQ9H814 394 aaKnown RBP19.07■□□□□ 0.64
IRF3-223ENST00000599223 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
IRF3-223ENST00000599223 CTCFP49711 727 aaPredicted RBP19.06■□□□□ 0.64
IRF3-223ENST00000599223 AIDAQ96BJ3 306 aa19.06■□□□□ 0.64
IRF3-223ENST00000599223 GPR101Q96P66 508 aaPredicted RBP19.06■□□□□ 0.64
IRF3-223ENST00000599223 GLIS2Q9BZE0 524 aaPredicted RBP19.06■□□□□ 0.64
IRF3-223ENST00000599223 PRDM10Q9NQV6 1147 aa19.06■□□□□ 0.64
IRF3-223ENST00000599223 IFT57Q9NWB7 429 aa19.06■□□□□ 0.64
IRF3-223ENST00000599223 PSME4Q14997 1843 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
IRF3-223ENST00000599223 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
IRF3-223ENST00000599223 HSPA8P11142 646 aaKnown RBP19.05■□□□□ 0.64
IRF3-223ENST00000599223 LBX1P52954 281 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 GPSM2P81274 684 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 CYP4F22Q6NT55 531 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 CAPNS2Q96L46 248 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 DBNDD1Q9H9R9 158 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 POLLQ9UGP5 575 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 RTL9Q8NET4 1388 aa19.05■□□□□ 0.64
IRF3-223ENST00000599223 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
IRF3-223ENST00000599223 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
IRF3-223ENST00000599223 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
IRF3-223ENST00000599223 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
IRF3-223ENST00000599223 ZBTB12Q9Y330 459 aaPredicted RBP19.04■□□□□ 0.64
IRF3-223ENST00000599223 TLL2Q9Y6L7 1015 aa19.04■□□□□ 0.64
IRF3-223ENST00000599223 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
IRF3-223ENST00000599223 MYH3P11055 1940 aa19.04■□□□□ 0.64
IRF3-223ENST00000599223 GRM1Q13255 1194 aa19.03■□□□□ 0.64
IRF3-223ENST00000599223 PAXIP1Q6ZW49 1069 aaPredicted RBP19.03■□□□□ 0.64
IRF3-223ENST00000599223 MICALL2Q8IY33 904 aa19.03■□□□□ 0.64
IRF3-223ENST00000599223 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
IRF3-223ENST00000599223 PSMD14O00487 310 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 EGFRP00533 1210 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 GNAI1P63096 354 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 GOLGA2Q08379 1002 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 TNIP1Q15025 636 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 RIC3Q7Z5B4 369 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 ZBTB38Q8NAP3 1195 aaPredicted RBP19.02■□□□□ 0.64
IRF3-223ENST00000599223 JARID2Q92833 1246 aaPredicted RBP19.02■□□□□ 0.64
IRF3-223ENST00000599223 MYD88Q99836 296 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 SEC31BQ9NQW1 1179 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 KCNQ5Q9NR82 932 aa19.02■□□□□ 0.64
IRF3-223ENST00000599223 CNOT7Q9UIV1 285 aaKnown RBP19.02■□□□□ 0.64
IRF3-223ENST00000599223 ZNF646O15015 1829 aaPredicted RBP19.02■□□□□ 0.63
IRF3-223ENST00000599223 CELF2O95319 508 aaKnown RBP19.01■□□□□ 0.63
IRF3-223ENST00000599223 WASHC4Q2M389 1173 aa19.01■□□□□ 0.63
IRF3-223ENST00000599223 TSPYL6Q8N831 410 aa19.01■□□□□ 0.63
IRF3-223ENST00000599223 C6orf229H3BNL8 230 aa19■□□□□ 0.63
IRF3-223ENST00000599223 ECE2O60344 883 aa19■□□□□ 0.63
IRF3-223ENST00000599223 AOC2O75106 756 aa19■□□□□ 0.63
IRF3-223ENST00000599223 DOK7Q18PE1 504 aa19■□□□□ 0.63
IRF3-223ENST00000599223 SAMD7Q7Z3H4 446 aa19■□□□□ 0.63
IRF3-223ENST00000599223 SAPCD2Q86UD0 394 aa19■□□□□ 0.63
IRF3-223ENST00000599223 TBC1D16Q8TBP0 767 aa19■□□□□ 0.63
IRF3-223ENST00000599223 RPS8P62241 208 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms