RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 ZNF541Q9H0D2 1346 aa10.8□□□□□ -0.68
DDB1-208ENST00000537120 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
DDB1-208ENST00000537120 IRS4O14654 1257 aaPredicted RBP10.79□□□□□ -0.68
DDB1-208ENST00000537120 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 GRAPQ13588 217 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 AOC3Q16853 763 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 GRAPLQ8TC17 118 aaPredicted RBP10.79□□□□□ -0.68
DDB1-208ENST00000537120 L3MBTL3Q96JM7 780 aaPredicted RBP10.79□□□□□ -0.68
DDB1-208ENST00000537120 MYD88Q99836 296 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 ISCA1Q9BUE6 129 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 VPS33BQ9H267 617 aa10.79□□□□□ -0.68
DDB1-208ENST00000537120 PHAXQ9H814 394 aaKnown RBP10.79□□□□□ -0.68
DDB1-208ENST00000537120 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 G3V3G9 751 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 C6orf229H3BNL8 230 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 TRIM28Q13263 835 aaKnown RBP10.78□□□□□ -0.68
DDB1-208ENST00000537120 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 TMC4Q7Z404 712 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 TSR2Q969E8 191 aaKnown RBP10.78□□□□□ -0.68
DDB1-208ENST00000537120 BCL2L13Q9BXK5 485 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 ZNRF3Q9ULT6 936 aa10.78□□□□□ -0.68
DDB1-208ENST00000537120 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
DDB1-208ENST00000537120 NEXNQ0ZGT2 675 aa10.77□□□□□ -0.69
DDB1-208ENST00000537120 TNIP1Q15025 636 aa10.77□□□□□ -0.69
DDB1-208ENST00000537120 CNTROBQ8N137 903 aa10.77□□□□□ -0.69
DDB1-208ENST00000537120 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
DDB1-208ENST00000537120 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.69
DDB1-208ENST00000537120 RIMBP2O15034 1052 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 RPS8P62241 208 aaKnown RBP10.76□□□□□ -0.69
DDB1-208ENST00000537120 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
DDB1-208ENST00000537120 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
DDB1-208ENST00000537120 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 TSPYL6Q8N831 410 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 ZBTB38Q8NAP3 1195 aaPredicted RBP10.76□□□□□ -0.69
DDB1-208ENST00000537120 CCDC191Q8NCU4 936 aa10.76□□□□□ -0.69
DDB1-208ENST00000537120 MKRN1Q9UHC7 482 aaKnown RBP10.76□□□□□ -0.69
DDB1-208ENST00000537120 TMEM88BA6NKF7 163 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 RAD17O75943 681 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 CCDC27Q2M243 656 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 TWISTNBQ3B726 338 aaPredicted RBP10.75□□□□□ -0.69
DDB1-208ENST00000537120 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 CIAPIN1Q6FI81 312 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 SLC51AQ86UW1 340 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 CELF1Q92879 486 aaKnown RBP10.75□□□□□ -0.69
DDB1-208ENST00000537120 CCDC85AQ96PX6 553 aaPredicted RBP10.75□□□□□ -0.69
DDB1-208ENST00000537120 METTL22Q9BUU2 404 aaPredicted RBP10.75□□□□□ -0.69
DDB1-208ENST00000537120 RTFDC1Q9BY42 306 aaPredicted RBP10.75□□□□□ -0.69
DDB1-208ENST00000537120 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 MAP3K2Q9Y2U5 619 aa10.75□□□□□ -0.69
DDB1-208ENST00000537120 SCN4AP35499 1836 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 PI4KAP2A4QPH2 592 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 PDE8AO60658 829 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 PCCAP05165 728 aaPredicted RBP10.74□□□□□ -0.69
DDB1-208ENST00000537120 EPS15P42566 896 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 CXCL9Q07325 125 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 USP50Q70EL3 339 aaPredicted RBP10.74□□□□□ -0.69
DDB1-208ENST00000537120 PI4KAP1Q8N8J0 262 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 JMYQ8N9B5 988 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 EYA3Q99504 573 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 ZC3H12CQ9C0D7 883 aaKnown RBP10.74□□□□□ -0.69
DDB1-208ENST00000537120 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
DDB1-208ENST00000537120 ANKRD36CQ5JPF3 1778 aa10.74□□□□□ -0.69
DDB1-208ENST00000537120 H7C1D1 291 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
DDB1-208ENST00000537120 GPSM2P81274 684 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 KIAA2012Q0VF49 1180 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 WDR63Q8IWG1 891 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 SEC31BQ9NQW1 1179 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 ADARB2Q9NS39 739 aaKnown RBP10.73□□□□□ -0.69
DDB1-208ENST00000537120 ABT1Q9ULW3 272 aaKnown RBP10.73□□□□□ -0.69
DDB1-208ENST00000537120 IL16Q14005 1332 aa10.73□□□□□ -0.69
DDB1-208ENST00000537120 ITGBL1O95965 494 aaPredicted RBP10.72□□□□□ -0.69
DDB1-208ENST00000537120 SCNN1DP51172 638 aa10.72□□□□□ -0.69
DDB1-208ENST00000537120 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
DDB1-208ENST00000537120 PAXIP1Q6ZW49 1069 aaPredicted RBP10.72□□□□□ -0.69
DDB1-208ENST00000537120 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
DDB1-208ENST00000537120 GPRC5DQ9NZD1 345 aa10.72□□□□□ -0.69
DDB1-208ENST00000537120 CNOT7Q9UIV1 285 aaKnown RBP10.72□□□□□ -0.69
DDB1-208ENST00000537120 UFL1O94874 794 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 HSPA1AP0DMV8 641 aaKnown RBP10.71□□□□□ -0.69
DDB1-208ENST00000537120 HSPA1BP0DMV9 641 aaKnown RBP10.71□□□□□ -0.69
DDB1-208ENST00000537120 TAF1P21675 1872 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
DDB1-208ENST00000537120 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 PASKQ96RG2 1323 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 DBNDD1Q9H9R9 158 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
DDB1-208ENST00000537120 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
DDB1-208ENST00000537120 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
DDB1-208ENST00000537120 GRM1Q13255 1194 aa10.7□□□□□ -0.7
DDB1-208ENST00000537120 RBM26Q5T8P6 1007 aaKnown RBP10.7□□□□□ -0.7
DDB1-208ENST00000537120 G2E3Q7L622 706 aa10.7□□□□□ -0.7
DDB1-208ENST00000537120 TBC1D16Q8TBP0 767 aa10.7□□□□□ -0.7
DDB1-208ENST00000537120 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms