RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 NFKBIEO00221 500 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 FKBP4Q02790 459 aaKnown RBP eCLIP27.67■■■□□ 2.02
SSPN-204ENST00000535504 BEND3Q5T5X7 828 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 C7orf43Q8WVR3 580 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 UTRNP46939 3433 aa27.66■■■□□ 2.02
SSPN-204ENST00000535504 JARID2Q92833 1246 aaPredicted RBP27.66■■■□□ 2.02
SSPN-204ENST00000535504 FER1L6Q2WGJ9 1857 aa27.66■■■□□ 2.02
SSPN-204ENST00000535504 H7C1W4 665 aa27.65■■■□□ 2.02
SSPN-204ENST00000535504 API5Q9BZZ5 524 aaKnown RBP27.65■■■□□ 2.02
SSPN-204ENST00000535504 GPBP1L1Q9HC44 474 aaPredicted RBP27.65■■■□□ 2.02
SSPN-204ENST00000535504 ATP6V0A2Q9Y487 856 aa27.65■■■□□ 2.02
SSPN-204ENST00000535504 CTSWP56202 376 aa27.64■■■□□ 2.02
SSPN-204ENST00000535504 SUPT20HQ8NEM7 779 aa27.64■■■□□ 2.02
SSPN-204ENST00000535504 IPO8O15397 1037 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 RARSP54136 660 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 SP8Q8IXZ3 490 aa27.63■■■□□ 2.01
SSPN-204ENST00000535504 CDC5LQ99459 802 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 SBF1O95248 1867 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 ZNF526Q8TF50 670 aaPredicted RBP27.62■■■□□ 2.01
SSPN-204ENST00000535504 PSMD1Q99460 953 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 KDM2BQ8NHM5 1336 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 GRM8O00222 908 aa27.61■■■□□ 2.01
SSPN-204ENST00000535504 BRPF1P55201 1214 aaPredicted RBP27.61■■■□□ 2.01
SSPN-204ENST00000535504 CCDC85AQ96PX6 553 aaPredicted RBP27.61■■■□□ 2.01
SSPN-204ENST00000535504 RPS8P62241 208 aaKnown RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 DPY19L2Q6NUT2 758 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 DPP8Q6V1X1 898 aaPredicted RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 ANKRD18AQ8IVF6 992 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 MPNDQ8N594 471 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 PLA2G12BQ9BX93 195 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 NOB1Q9ULX3 412 aaKnown RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 MYH3P11055 1940 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 CCDC88AQ3V6T2 1871 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 OLFM4Q6UX06 510 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 JDP2Q8WYK2 163 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 IARSP41252 1262 aaKnown RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 CCT4P50991 539 aaKnown RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 ZNF277Q9NRM2 450 aaPredicted RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 CHMP3Q9Y3E7 222 aa27.58■■■□□ 2.01
SSPN-204ENST00000535504 TTLL11Q8NHH1 800 aa27.57■■■□□ 2
SSPN-204ENST00000535504 CELF1Q92879 486 aaKnown RBP27.57■■■□□ 2
SSPN-204ENST00000535504 IGHMBP2P38935 993 aaKnown RBP27.56■■■□□ 2
SSPN-204ENST00000535504 ARHGAP45Q92619 1136 aa27.56■■■□□ 2
SSPN-204ENST00000535504 HDAC5Q9UQL6 1122 aa27.56■■■□□ 2
SSPN-204ENST00000535504 VPS33BQ9H267 617 aa27.55■■■□□ 2
SSPN-204ENST00000535504 SEC31BQ9NQW1 1179 aa27.55■■■□□ 2
SSPN-204ENST00000535504 TIAM2Q8IVF5 1701 aa27.54■■■□□ 2
SSPN-204ENST00000535504 LARGE2Q8N3Y3 721 aa27.54■■■□□ 2
SSPN-204ENST00000535504 RTL9Q8NET4 1388 aa27.54■■■□□ 2
SSPN-204ENST00000535504 FRAT1Q92837 279 aaPredicted RBP27.54■■■□□ 2
SSPN-204ENST00000535504 NSFL1CQ9UNZ2 370 aaKnown RBP27.54■■■□□ 2
SSPN-204ENST00000535504 DICER1Q9UPY3 1922 aaKnown RBP27.54■■■□□ 2
SSPN-204ENST00000535504 ANKRD18BA2A2Z9 1011 aa27.53■■■□□ 2
SSPN-204ENST00000535504 PPIP5K2O43314 1243 aa27.53■■■□□ 2
SSPN-204ENST00000535504 CASP7P55210 303 aa27.53■■■□□ 2
SSPN-204ENST00000535504 MPHOSPH8Q99549 860 aa27.53■■■□□ 2
SSPN-204ENST00000535504 GREM2Q9H772 168 aa27.53■■■□□ 2
SSPN-204ENST00000535504 ANKIB1Q9P2G1 1089 aa27.53■■■□□ 2
SSPN-204ENST00000535504 IFIT5Q13325 482 aaKnown RBP27.52■■■□□ 2
SSPN-204ENST00000535504 TAF7LQ5H9L4 462 aa27.52■■■□□ 2
SSPN-204ENST00000535504 NIM1KQ8IY84 436 aa27.52■■■□□ 2
SSPN-204ENST00000535504 TAF1P21675 1872 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 ITGA6P23229 1130 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 EYA3Q99504 573 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 GLTPD2A6NH11 291 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 C6orf229H3BNL8 230 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 PRELPP51888 382 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
SSPN-204ENST00000535504 CCDC57Q2TAC2 916 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 C16orf71Q8IYS4 520 aaPredicted RBP27.5■■□□□ 1.99
SSPN-204ENST00000535504 CSF1RP07333 972 aa27.49■■□□□ 1.99
SSPN-204ENST00000535504 FAM161AQ3B820 660 aa27.49■■□□□ 1.99
SSPN-204ENST00000535504 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
SSPN-204ENST00000535504 BSDC1Q9NW68 430 aaPredicted RBP27.49■■□□□ 1.99
SSPN-204ENST00000535504 BCAR3O75815 825 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 ZKSCAN2Q63HK3 967 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 ATF7IPQ6VMQ6 1270 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 G3V3G9 751 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 DCAF8Q5TAQ9 597 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 LMBR1LQ6UX01 489 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 GGA1Q9UJY5 639 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 SNED1Q8TER0 1413 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 LRRC37AA6NMS7 1700 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 UTYO14607 1347 aa27.46■■□□□ 1.99
SSPN-204ENST00000535504 NBPF7P0C2Y1 421 aaPredicted RBP27.46■■□□□ 1.99
SSPN-204ENST00000535504 FTSJ3Q8IY81 847 aaKnown RBP27.46■■□□□ 1.99
SSPN-204ENST00000535504 XDHP47989 1333 aa27.45■■□□□ 1.99
SSPN-204ENST00000535504 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.98
SSPN-204ENST00000535504 GPSM2P81274 684 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 FOXO4P98177 505 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 AOC3Q16853 763 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 WASHC4Q2M389 1173 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 UFL1O94874 794 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 SUCLG2Q96I99 432 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 ANKRD2Q9GZV1 360 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 ATP2B4P23634 1241 aa27.43■■□□□ 1.98
SSPN-204ENST00000535504 KIAA2012Q0VF49 1180 aa27.43■■□□□ 1.98
SSPN-204ENST00000535504 ZC3H12CQ9C0D7 883 aaKnown RBP27.43■■□□□ 1.98
SSPN-204ENST00000535504 PODXL2Q9NZ53 605 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms