RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GRAPQ13588 217 aa24.14■■□□□ 1.45
PRKCB-209ENST00000498058 GRAPLQ8TC17 118 aaPredicted RBP24.14■■□□□ 1.45
PRKCB-209ENST00000498058 DBF4Q9UBU7 674 aaPredicted RBP24.14■■□□□ 1.45
PRKCB-209ENST00000498058 LRRC37AA6NMS7 1700 aa24.13■■□□□ 1.45
PRKCB-209ENST00000498058 DDX46Q7L014 1031 aaKnown RBP24.13■■□□□ 1.45
PRKCB-209ENST00000498058 MPNDQ8N594 471 aa24.13■■□□□ 1.45
PRKCB-209ENST00000498058 FAM89AQ96GI7 184 aa24.13■■□□□ 1.45
PRKCB-209ENST00000498058 LMOD1P29536 600 aaPredicted RBP24.12■■□□□ 1.45
PRKCB-209ENST00000498058 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
PRKCB-209ENST00000498058 TNS4Q8IZW8 715 aa24.12■■□□□ 1.45
PRKCB-209ENST00000498058 VPS33BQ9H267 617 aa24.12■■□□□ 1.45
PRKCB-209ENST00000498058 ZNRF3Q9ULT6 936 aa24.11■■□□□ 1.45
PRKCB-209ENST00000498058 FOXN1O15353 648 aa24.1■■□□□ 1.45
PRKCB-209ENST00000498058 KIAA2012Q0VF49 1180 aa24.1■■□□□ 1.45
PRKCB-209ENST00000498058 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
PRKCB-209ENST00000498058 SUPT20HQ8NEM7 779 aa24.1■■□□□ 1.45
PRKCB-209ENST00000498058 CELF1Q92879 486 aaKnown RBP24.1■■□□□ 1.45
PRKCB-209ENST00000498058 TMX4Q9H1E5 349 aaPredicted RBP24.1■■□□□ 1.45
PRKCB-209ENST00000498058 PHAXQ9H814 394 aaKnown RBP24.1■■□□□ 1.45
PRKCB-209ENST00000498058 HYPKQ9NX55 129 aa24.1■■□□□ 1.45
PRKCB-209ENST00000498058 GPRC5DQ9NZD1 345 aa24.1■■□□□ 1.45
PRKCB-209ENST00000498058 YDJCA8MPS7 323 aa24.09■■□□□ 1.45
PRKCB-209ENST00000498058 ELL2O00472 640 aaPredicted RBP24.09■■□□□ 1.45
PRKCB-209ENST00000498058 SF3B3Q15393 1217 aaKnown RBP24.09■■□□□ 1.45
PRKCB-209ENST00000498058 CCDC184Q52MB2 194 aa24.09■■□□□ 1.45
PRKCB-209ENST00000498058 RASSF10A6NK89 507 aa24.08■■□□□ 1.45
PRKCB-209ENST00000498058 TRAF5O00463 557 aa24.08■■□□□ 1.45
PRKCB-209ENST00000498058 GMPSP49915 693 aaPredicted RBP24.08■■□□□ 1.45
PRKCB-209ENST00000498058 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.45
PRKCB-209ENST00000498058 TRPM7Q96QT4 1865 aa24.07■■□□□ 1.44
PRKCB-209ENST00000498058 CAPN15O75808 1086 aa24.07■■□□□ 1.44
PRKCB-209ENST00000498058 RAD17O75943 681 aa24.07■■□□□ 1.44
PRKCB-209ENST00000498058 C8orf58Q8NAV2 365 aa24.07■■□□□ 1.44
PRKCB-209ENST00000498058 IFT57Q9NWB7 429 aa24.07■■□□□ 1.44
PRKCB-209ENST00000498058 SHTN1A0MZ66 631 aa24.06■■□□□ 1.44
PRKCB-209ENST00000498058 TRIM28Q13263 835 aaKnown RBP24.06■■□□□ 1.44
PRKCB-209ENST00000498058 DEFB115Q30KQ5 88 aa24.06■■□□□ 1.44
PRKCB-209ENST00000498058 CST9Q5W186 159 aa24.06■■□□□ 1.44
PRKCB-209ENST00000498058 CIAPIN1Q6FI81 312 aa24.05■■□□□ 1.44
PRKCB-209ENST00000498058 ADARB2Q9NS39 739 aaKnown RBP24.05■■□□□ 1.44
PRKCB-209ENST00000498058 IRS4O14654 1257 aaPredicted RBP24.04■■□□□ 1.44
PRKCB-209ENST00000498058 HIRAP54198 1017 aaPredicted RBP24.04■■□□□ 1.44
PRKCB-209ENST00000498058 GNAI1P63096 354 aa24.04■■□□□ 1.44
PRKCB-209ENST00000498058 GPSM2P81274 684 aa24.03■■□□□ 1.44
PRKCB-209ENST00000498058 TMC4Q7Z404 712 aa24.03■■□□□ 1.44
PRKCB-209ENST00000498058 RIC3Q7Z5B4 369 aa24.03■■□□□ 1.44
PRKCB-209ENST00000498058 WBP1LQ9NX94 342 aa24.03■■□□□ 1.44
PRKCB-209ENST00000498058 POLLQ9UGP5 575 aa24.03■■□□□ 1.44
PRKCB-209ENST00000498058 TSPYL6Q8N831 410 aa24.02■■□□□ 1.44
PRKCB-209ENST00000498058 JARID2Q92833 1246 aaPredicted RBP24.02■■□□□ 1.44
PRKCB-209ENST00000498058 GPR101Q96P66 508 aaPredicted RBP24.02■■□□□ 1.44
PRKCB-209ENST00000498058 MYD88Q99836 296 aa24.02■■□□□ 1.44
PRKCB-209ENST00000498058 ABT1Q9ULW3 272 aaKnown RBP24.02■■□□□ 1.44
PRKCB-209ENST00000498058 WDR33Q9C0J8 1336 aaKnown RBP24.02■■□□□ 1.44
PRKCB-209ENST00000498058 TRPM4Q8TD43 1214 aa24.01■■□□□ 1.43
PRKCB-209ENST00000498058 SEC31BQ9NQW1 1179 aa24.01■■□□□ 1.43
PRKCB-209ENST00000498058 PGAP2Q9UHJ9 254 aa24.01■■□□□ 1.43
PRKCB-209ENST00000498058 NSFL1CQ9UNZ2 370 aaKnown RBP24.01■■□□□ 1.43
PRKCB-209ENST00000498058 RIMBP2O15034 1052 aa24■■□□□ 1.43
PRKCB-209ENST00000498058 GOLGA2Q08379 1002 aa24■■□□□ 1.43
PRKCB-209ENST00000498058 ZBTB38Q8NAP3 1195 aaPredicted RBP24■■□□□ 1.43
PRKCB-209ENST00000498058 GLIS2Q9BZE0 524 aaPredicted RBP24■■□□□ 1.43
PRKCB-209ENST00000498058 DBNDD1Q9H9R9 158 aa24■■□□□ 1.43
PRKCB-209ENST00000498058 KCNQ5Q9NR82 932 aa24■■□□□ 1.43
PRKCB-209ENST00000498058 ZBTB12Q9Y330 459 aaPredicted RBP24■■□□□ 1.43
PRKCB-209ENST00000498058 TNIP1Q15025 636 aa23.99■■□□□ 1.43
PRKCB-209ENST00000498058 WASHC4Q2M389 1173 aa23.99■■□□□ 1.43
PRKCB-209ENST00000498058 BCL2L13Q9BXK5 485 aa23.99■■□□□ 1.43
PRKCB-209ENST00000498058 RPS8P62241 208 aaKnown RBP23.98■■□□□ 1.43
PRKCB-209ENST00000498058 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
PRKCB-209ENST00000498058 THSD7BQ9C0I4 1608 aa23.98■■□□□ 1.43
PRKCB-209ENST00000498058 SCN9AQ15858 1988 aa23.98■■□□□ 1.43
PRKCB-209ENST00000498058 PSMD14O00487 310 aa23.97■■□□□ 1.43
PRKCB-209ENST00000498058 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
PRKCB-209ENST00000498058 CYP4F22Q6NT55 531 aa23.97■■□□□ 1.43
PRKCB-209ENST00000498058 TSR2Q969E8 191 aaKnown RBP23.97■■□□□ 1.43
PRKCB-209ENST00000498058 CDHR2Q9BYE9 1310 aa23.97■■□□□ 1.43
PRKCB-209ENST00000498058 RTL9Q8NET4 1388 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 C6orf229H3BNL8 230 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 CTCFP49711 727 aaPredicted RBP23.96■■□□□ 1.43
PRKCB-209ENST00000498058 DOK7Q18PE1 504 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 DLK2Q6UY11 383 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 TBC1D16Q8TBP0 767 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 CAPNS2Q96L46 248 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 PRDM10Q9NQV6 1147 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 TLL2Q9Y6L7 1015 aa23.96■■□□□ 1.43
PRKCB-209ENST00000498058 POLR2AP24928 1970 aaKnown RBP23.95■■□□□ 1.42
PRKCB-209ENST00000498058 EGFRP00533 1210 aa23.95■■□□□ 1.42
PRKCB-209ENST00000498058 PCCAP05165 728 aaPredicted RBP23.95■■□□□ 1.42
PRKCB-209ENST00000498058 LBX1P52954 281 aa23.95■■□□□ 1.42
PRKCB-209ENST00000498058 MICALL2Q8IY33 904 aa23.95■■□□□ 1.42
PRKCB-209ENST00000498058 CCDC191Q8NCU4 936 aa23.95■■□□□ 1.42
PRKCB-209ENST00000498058 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
PRKCB-209ENST00000498058 METTL22Q9BUU2 404 aaPredicted RBP23.95■■□□□ 1.42
PRKCB-209ENST00000498058 ECE2O60344 883 aa23.94■■□□□ 1.42
PRKCB-209ENST00000498058 HSPA8P11142 646 aaKnown RBP23.94■■□□□ 1.42
PRKCB-209ENST00000498058 SAMD7Q7Z3H4 446 aa23.94■■□□□ 1.42
PRKCB-209ENST00000498058 AIDAQ96BJ3 306 aa23.94■■□□□ 1.42
PRKCB-209ENST00000498058 CELF2O95319 508 aaKnown RBP23.93■■□□□ 1.42
PRKCB-209ENST00000498058 CCDC30Q5VVM6 783 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms