RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 HOXB7P09629 217 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 CXCL9Q07325 125 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 GRAPQ13588 217 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 MPNDQ8N594 471 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
USF1-207ENST00000496363 CFAP44Q96MT7 982 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
USF1-207ENST00000496363 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
USF1-207ENST00000496363 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
USF1-207ENST00000496363 ZNRF3Q9ULT6 936 aa16.95■□□□□ 0.3
USF1-207ENST00000496363 APAF1O14727 1248 aa16.94■□□□□ 0.3
USF1-207ENST00000496363 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
USF1-207ENST00000496363 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
USF1-207ENST00000496363 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
USF1-207ENST00000496363 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
USF1-207ENST00000496363 RASSF10A6NK89 507 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 TRAF5O00463 557 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 RAD17O75943 681 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 ZNF853P0CG23 659 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
USF1-207ENST00000496363 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
USF1-207ENST00000496363 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
USF1-207ENST00000496363 ABT1Q9ULW3 272 aaKnown RBP16.93■□□□□ 0.3
USF1-207ENST00000496363 DEFB115Q30KQ5 88 aa16.92■□□□□ 0.3
USF1-207ENST00000496363 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
USF1-207ENST00000496363 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
USF1-207ENST00000496363 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
USF1-207ENST00000496363 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
USF1-207ENST00000496363 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
USF1-207ENST00000496363 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
USF1-207ENST00000496363 SHTN1A0MZ66 631 aa16.9■□□□□ 0.3
USF1-207ENST00000496363 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
USF1-207ENST00000496363 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
USF1-207ENST00000496363 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
USF1-207ENST00000496363 THSD7BQ9C0I4 1608 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
USF1-207ENST00000496363 CST9Q5W186 159 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 WBP1LQ9NX94 342 aa16.89■□□□□ 0.29
USF1-207ENST00000496363 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 GNAI1P63096 354 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 GPSM2P81274 684 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 PAXIP1Q6ZW49 1069 aaPredicted RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 GPR101Q96P66 508 aaPredicted RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 MYD88Q99836 296 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 GLIS2Q9BZE0 524 aaPredicted RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 NSFL1CQ9UNZ2 370 aaKnown RBP16.88■□□□□ 0.29
USF1-207ENST00000496363 SCN9AQ15858 1988 aa16.88■□□□□ 0.29
USF1-207ENST00000496363 RIMBP2O15034 1052 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
USF1-207ENST00000496363 GRM1Q13255 1194 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 TNIP1Q15025 636 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
USF1-207ENST00000496363 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
USF1-207ENST00000496363 CDHR2Q9BYE9 1310 aa16.87■□□□□ 0.29
USF1-207ENST00000496363 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 LBX1P52954 281 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
USF1-207ENST00000496363 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
USF1-207ENST00000496363 PSMD14O00487 310 aa16.85■□□□□ 0.29
USF1-207ENST00000496363 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
USF1-207ENST00000496363 CCDC184Q52MB2 194 aa16.85■□□□□ 0.29
USF1-207ENST00000496363 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
USF1-207ENST00000496363 CNOT7Q9UIV1 285 aaKnown RBP16.85■□□□□ 0.29
USF1-207ENST00000496363 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
USF1-207ENST00000496363 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 CELF2O95319 508 aaKnown RBP16.84■□□□□ 0.29
USF1-207ENST00000496363 HSPA8P11142 646 aaKnown RBP16.84■□□□□ 0.29
USF1-207ENST00000496363 RPS8P62241 208 aaKnown RBP16.84■□□□□ 0.29
USF1-207ENST00000496363 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 CCDC85AQ96PX6 553 aaPredicted RBP16.84■□□□□ 0.29
USF1-207ENST00000496363 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
USF1-207ENST00000496363 ECE2O60344 883 aa16.83■□□□□ 0.28
USF1-207ENST00000496363 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
USF1-207ENST00000496363 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
USF1-207ENST00000496363 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
USF1-207ENST00000496363 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
USF1-207ENST00000496363 ZNF408Q9H9D4 720 aa16.83■□□□□ 0.28
USF1-207ENST00000496363 MYH3P11055 1940 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 H7C1D1 291 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 AOC2O75106 756 aa16.82■□□□□ 0.28
USF1-207ENST00000496363 EGFRP00533 1210 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms