RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 DDX46Q7L014 1031 aaKnown RBP21.66■■□□□ 1.06
SRGAP3-209ENST00000490889 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
SRGAP3-209ENST00000490889 VPS33BQ9H267 617 aa21.66■■□□□ 1.06
SRGAP3-209ENST00000490889 ATP5J2-PTCD1G3V325 749 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 ANKRD13DQ6ZTN6 518 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 MPNDQ8N594 471 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 SUPT20HQ8NEM7 779 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 MBIPQ9NS73 344 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 GPRC5DQ9NZD1 345 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 DBF4Q9UBU7 674 aaPredicted RBP21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
SRGAP3-209ENST00000490889 KIAA2012Q0VF49 1180 aa21.64■■□□□ 1.05
SRGAP3-209ENST00000490889 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
SRGAP3-209ENST00000490889 FAM89AQ96GI7 184 aa21.64■■□□□ 1.05
SRGAP3-209ENST00000490889 ZNF853P0CG23 659 aa21.63■■□□□ 1.05
SRGAP3-209ENST00000490889 DEFB115Q30KQ5 88 aa21.63■■□□□ 1.05
SRGAP3-209ENST00000490889 TRAF5O00463 557 aa21.62■■□□□ 1.05
SRGAP3-209ENST00000490889 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
SRGAP3-209ENST00000490889 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
SRGAP3-209ENST00000490889 ADARB2Q9NS39 739 aaKnown RBP21.62■■□□□ 1.05
SRGAP3-209ENST00000490889 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
SRGAP3-209ENST00000490889 YDJCA8MPS7 323 aa21.61■■□□□ 1.05
SRGAP3-209ENST00000490889 RAD17O75943 681 aa21.61■■□□□ 1.05
SRGAP3-209ENST00000490889 RTL5Q5HYW3 569 aaPredicted RBP21.61■■□□□ 1.05
SRGAP3-209ENST00000490889 HYPKQ9NX55 129 aa21.61■■□□□ 1.05
SRGAP3-209ENST00000490889 WBP1LQ9NX94 342 aa21.61■■□□□ 1.05
SRGAP3-209ENST00000490889 APAF1O14727 1248 aa21.6■■□□□ 1.05
SRGAP3-209ENST00000490889 SF3B3Q15393 1217 aaKnown RBP21.6■■□□□ 1.05
SRGAP3-209ENST00000490889 CST9Q5W186 159 aa21.6■■□□□ 1.05
SRGAP3-209ENST00000490889 CIAPIN1Q6FI81 312 aa21.6■■□□□ 1.05
SRGAP3-209ENST00000490889 TRPM7Q96QT4 1865 aa21.6■■□□□ 1.05
SRGAP3-209ENST00000490889 WDR33Q9C0J8 1336 aaKnown RBP21.59■■□□□ 1.05
SRGAP3-209ENST00000490889 THSD7BQ9C0I4 1608 aa21.59■■□□□ 1.05
SRGAP3-209ENST00000490889 PHAXQ9H814 394 aaKnown RBP21.59■■□□□ 1.05
SRGAP3-209ENST00000490889 SHTN1A0MZ66 631 aa21.58■■□□□ 1.05
SRGAP3-209ENST00000490889 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
SRGAP3-209ENST00000490889 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 CTCFP49711 727 aaPredicted RBP21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 TRIM28Q13263 835 aaKnown RBP21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 AIDAQ96BJ3 306 aa21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
SRGAP3-209ENST00000490889 IRS4O14654 1257 aaPredicted RBP21.56■■□□□ 1.04
SRGAP3-209ENST00000490889 TRPM4Q8TD43 1214 aa21.56■■□□□ 1.04
SRGAP3-209ENST00000490889 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
SRGAP3-209ENST00000490889 CDHR2Q9BYE9 1310 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 LBX1P52954 281 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 GPSM2P81274 684 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 CYP4F22Q6NT55 531 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 C8orf58Q8NAV2 365 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 GLIS2Q9BZE0 524 aaPredicted RBP21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 POLLQ9UGP5 575 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 PGAP2Q9UHJ9 254 aa21.55■■□□□ 1.04
SRGAP3-209ENST00000490889 GNAI1P63096 354 aa21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 TNIP1Q15025 636 aa21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 CAPNS2Q96L46 248 aa21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 DBNDD1Q9H9R9 158 aa21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 ZBTB12Q9Y330 459 aaPredicted RBP21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 TLL2Q9Y6L7 1015 aa21.54■■□□□ 1.04
SRGAP3-209ENST00000490889 RIMBP2O15034 1052 aa21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 HSPA8P11142 646 aaKnown RBP21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 GOLGA2Q08379 1002 aa21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 WASHC4Q2M389 1173 aa21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 MYD88Q99836 296 aa21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 CNOT7Q9UIV1 285 aaKnown RBP21.53■■□□□ 1.04
SRGAP3-209ENST00000490889 PAXIP1Q6ZW49 1069 aaPredicted RBP21.52■■□□□ 1.04
SRGAP3-209ENST00000490889 ZBTB38Q8NAP3 1195 aaPredicted RBP21.52■■□□□ 1.04
SRGAP3-209ENST00000490889 SEC31BQ9NQW1 1179 aa21.52■■□□□ 1.04
SRGAP3-209ENST00000490889 C6orf229H3BNL8 230 aa21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 PSMD14O00487 310 aa21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 RPS8P62241 208 aaKnown RBP21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 GRM1Q13255 1194 aa21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 MICALL2Q8IY33 904 aa21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 JARID2Q92833 1246 aaPredicted RBP21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 KCNQ5Q9NR82 932 aa21.51■■□□□ 1.03
SRGAP3-209ENST00000490889 RTL9Q8NET4 1388 aa21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 CELF2O95319 508 aaKnown RBP21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 MAP2K1Q02750 393 aaPredicted RBP21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 TBC1D16Q8TBP0 767 aa21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 ZC3H15Q8WU90 426 aaKnown RBP21.5■■□□□ 1.03
SRGAP3-209ENST00000490889 SCN9AQ15858 1988 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 EGFRP00533 1210 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 ECE1P42892 770 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 CALD1Q05682 793 aaKnown RBP21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 DOK7Q18PE1 504 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 DLK2Q6UY11 383 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 SAMD7Q7Z3H4 446 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 SAPCD2Q86UD0 394 aa21.49■■□□□ 1.03
SRGAP3-209ENST00000490889 H7C1D1 291 aa21.48■■□□□ 1.03
SRGAP3-209ENST00000490889 ECE2O60344 883 aa21.48■■□□□ 1.03
SRGAP3-209ENST00000490889 AOC2O75106 756 aa21.48■■□□□ 1.03
SRGAP3-209ENST00000490889 PCCAP05165 728 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms