RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
LCN2-205ENST00000487719 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
LCN2-205ENST00000487719 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
LCN2-205ENST00000487719 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
LCN2-205ENST00000487719 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
LCN2-205ENST00000487719 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
LCN2-205ENST00000487719 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
LCN2-205ENST00000487719 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
LCN2-205ENST00000487719 NFKBIEO00221 500 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 ALDH1L1O75891 902 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 IGKV5-2P06315 115 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
LCN2-205ENST00000487719 SYNE4Q8N205 404 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
LCN2-205ENST00000487719 PSMD1Q99460 953 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 ATP6V0A2Q9Y487 856 aa11.84□□□□□ -0.51
LCN2-205ENST00000487719 SCN4AP35499 1836 aa11.83□□□□□ -0.51
LCN2-205ENST00000487719 F6X3S4 739 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 CTSWP56202 376 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
LCN2-205ENST00000487719 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
LCN2-205ENST00000487719 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
LCN2-205ENST00000487719 C7orf43Q8WVR3 580 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 SSH1Q8WYL5 1049 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
LCN2-205ENST00000487719 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
LCN2-205ENST00000487719 IARSP41252 1262 aaKnown RBP11.82□□□□□ -0.52
LCN2-205ENST00000487719 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
LCN2-205ENST00000487719 MPNDQ8N594 471 aa11.82□□□□□ -0.52
LCN2-205ENST00000487719 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
LCN2-205ENST00000487719 VPS33BQ9H267 617 aa11.82□□□□□ -0.52
LCN2-205ENST00000487719 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
LCN2-205ENST00000487719 H7C1W4 665 aa11.81□□□□□ -0.52
LCN2-205ENST00000487719 GRM8O00222 908 aa11.81□□□□□ -0.52
LCN2-205ENST00000487719 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
LCN2-205ENST00000487719 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
LCN2-205ENST00000487719 BEND3Q5T5X7 828 aa11.81□□□□□ -0.52
LCN2-205ENST00000487719 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
LCN2-205ENST00000487719 ZNF277Q9NRM2 450 aaPredicted RBP11.81□□□□□ -0.52
LCN2-205ENST00000487719 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
LCN2-205ENST00000487719 PPIP5K2O43314 1243 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 EIF6P56537 245 aaKnown RBP11.8□□□□□ -0.52
LCN2-205ENST00000487719 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
LCN2-205ENST00000487719 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
LCN2-205ENST00000487719 EYA3Q99504 573 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 ANKIB1Q9P2G1 1089 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
LCN2-205ENST00000487719 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 G3V3G9 751 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
LCN2-205ENST00000487719 RARSP54136 660 aaKnown RBP11.79□□□□□ -0.52
LCN2-205ENST00000487719 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
LCN2-205ENST00000487719 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
LCN2-205ENST00000487719 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
LCN2-205ENST00000487719 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
LCN2-205ENST00000487719 A0A1B0GUL6 1792 aa11.78□□□□□ -0.52
LCN2-205ENST00000487719 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
LCN2-205ENST00000487719 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
LCN2-205ENST00000487719 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
LCN2-205ENST00000487719 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
LCN2-205ENST00000487719 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
LCN2-205ENST00000487719 LTBP1Q14766 1721 aa11.77□□□□□ -0.52
LCN2-205ENST00000487719 PSME4Q14997 1843 aa11.77□□□□□ -0.52
LCN2-205ENST00000487719 IQCA1LA6NCM1 817 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
LCN2-205ENST00000487719 ITGA6P23229 1130 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.53
LCN2-205ENST00000487719 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
LCN2-205ENST00000487719 GREM2Q9H772 168 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
LCN2-205ENST00000487719 XDHP47989 1333 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
LCN2-205ENST00000487719 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
LCN2-205ENST00000487719 KCNJ4P48050 445 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 AOC3Q16853 763 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
LCN2-205ENST00000487719 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
LCN2-205ENST00000487719 UFL1O94874 794 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
LCN2-205ENST00000487719 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 CASP7P55210 303 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
LCN2-205ENST00000487719 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms