RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 BBOX1O75936 387 aa12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 GRAPQ13588 217 aa12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 SP8Q8IXZ3 490 aa12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 MPNDQ8N594 471 aa12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-205ENST00000472246 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
NUDCD3-205ENST00000472246 CXCL9Q07325 125 aa12.78□□□□□ -0.36
NUDCD3-205ENST00000472246 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
NUDCD3-205ENST00000472246 FAM89AQ96GI7 184 aa12.78□□□□□ -0.36
NUDCD3-205ENST00000472246 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
NUDCD3-205ENST00000472246 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 TRAF5O00463 557 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 FOXN1O15353 648 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 KIAA2012Q0VF49 1180 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 USP50Q70EL3 339 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 VPS33BQ9H267 617 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 HYPKQ9NX55 129 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
NUDCD3-205ENST00000472246 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 RAD17O75943 681 aa12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 CIAPIN1Q6FI81 312 aa12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 PHAXQ9H814 394 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 ADARB2Q9NS39 739 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
NUDCD3-205ENST00000472246 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-205ENST00000472246 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
NUDCD3-205ENST00000472246 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
NUDCD3-205ENST00000472246 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 GNAI1P63096 354 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 MYD88Q99836 296 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
NUDCD3-205ENST00000472246 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 GPSM2P81274 684 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 CST9Q5W186 159 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 TRPM4Q8TD43 1214 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 DBNDD1Q9H9R9 158 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-205ENST00000472246 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 HIRAP54198 1017 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 GRM1Q13255 1194 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 TNIP1Q15025 636 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 ZBTB38Q8NAP3 1195 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-205ENST00000472246 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 PSMD14O00487 310 aa12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-205ENST00000472246 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 LBX1P52954 281 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 CAPNS2Q96L46 248 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 PRDM10Q9NQV6 1147 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 KCNQ5Q9NR82 932 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
NUDCD3-205ENST00000472246 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 ECE2O60344 883 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 HSPA8P11142 646 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 TBC1D16Q8TBP0 767 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 ZNF408Q9H9D4 720 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 PGAP2Q9UHJ9 254 aa12.69□□□□□ -0.38
NUDCD3-205ENST00000472246 H7C1D1 291 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 AOC2O75106 756 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms