RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 GRAPLQ8TC17 118 aaPredicted RBP28.06■■■□□ 2.08
EDEM1-205ENST00000465187 GNAI1P63096 354 aa28.05■■■□□ 2.08
EDEM1-205ENST00000465187 DDX46Q7L014 1031 aaKnown RBP28.05■■■□□ 2.08
EDEM1-205ENST00000465187 SP8Q8IXZ3 490 aa28.05■■■□□ 2.08
EDEM1-205ENST00000465187 RTFDC1Q9BY42 306 aaPredicted RBP28.05■■■□□ 2.08
EDEM1-205ENST00000465187 BBOX1O75936 387 aa28.04■■■□□ 2.08
EDEM1-205ENST00000465187 HSPA1AP0DMV8 641 aaKnown RBP28.04■■■□□ 2.08
EDEM1-205ENST00000465187 HSPA1BP0DMV9 641 aaKnown RBP28.04■■■□□ 2.08
EDEM1-205ENST00000465187 GRIPAP1Q4V328 841 aa28.04■■■□□ 2.08
EDEM1-205ENST00000465187 DPP8Q6V1X1 898 aaPredicted RBP28.04■■■□□ 2.08
EDEM1-205ENST00000465187 CELF1Q92879 486 aaKnown RBP28.04■■■□□ 2.08
EDEM1-205ENST00000465187 MPNDQ8N594 471 aa28.03■■■□□ 2.08
EDEM1-205ENST00000465187 JARID2Q92833 1246 aaPredicted RBP28.03■■■□□ 2.08
EDEM1-205ENST00000465187 TSR2Q969E8 191 aaKnown RBP28.03■■■□□ 2.08
EDEM1-205ENST00000465187 CXCL9Q07325 125 aa28.02■■■□□ 2.08
EDEM1-205ENST00000465187 CNTROBQ8N137 903 aa28.02■■■□□ 2.08
EDEM1-205ENST00000465187 PNMA8AQ86V59 439 aaPredicted RBP28.01■■■□□ 2.07
EDEM1-205ENST00000465187 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
EDEM1-205ENST00000465187 MYD88Q99836 296 aa28■■■□□ 2.07
EDEM1-205ENST00000465187 CNTNAP1P78357 1384 aa27.99■■■□□ 2.07
EDEM1-205ENST00000465187 IRS4O14654 1257 aaPredicted RBP27.99■■■□□ 2.07
EDEM1-205ENST00000465187 TMX4Q9H1E5 349 aaPredicted RBP27.99■■■□□ 2.07
EDEM1-205ENST00000465187 ZNRF3Q9ULT6 936 aa27.99■■■□□ 2.07
EDEM1-205ENST00000465187 YDJCA8MPS7 323 aa27.98■■■□□ 2.07
EDEM1-205ENST00000465187 RAD17O75943 681 aa27.98■■■□□ 2.07
EDEM1-205ENST00000465187 LMOD1P29536 600 aaPredicted RBP27.98■■■□□ 2.07
EDEM1-205ENST00000465187 KIAA2012Q0VF49 1180 aa27.98■■■□□ 2.07
EDEM1-205ENST00000465187 SF3B3Q15393 1217 aaKnown RBP27.98■■■□□ 2.07
EDEM1-205ENST00000465187 GPR101Q96P66 508 aaPredicted RBP27.98■■■□□ 2.07
EDEM1-205ENST00000465187 SHTN1A0MZ66 631 aa27.97■■■□□ 2.07
EDEM1-205ENST00000465187 TMEM88BA6NKF7 163 aa27.97■■■□□ 2.07
EDEM1-205ENST00000465187 CALD1Q05682 793 aaKnown RBP27.97■■■□□ 2.07
EDEM1-205ENST00000465187 GOLGA2Q08379 1002 aa27.97■■■□□ 2.07
EDEM1-205ENST00000465187 TRIM28Q13263 835 aaKnown RBP27.97■■■□□ 2.07
EDEM1-205ENST00000465187 SUPT20HQ8NEM7 779 aa27.97■■■□□ 2.07
EDEM1-205ENST00000465187 GMPSP49915 693 aaPredicted RBP27.96■■■□□ 2.07
EDEM1-205ENST00000465187 SEC31BQ9NQW1 1179 aa27.96■■■□□ 2.07
EDEM1-205ENST00000465187 TRPM7Q96QT4 1865 aa27.95■■■□□ 2.07
EDEM1-205ENST00000465187 TRAF5O00463 557 aa27.95■■■□□ 2.06
EDEM1-205ENST00000465187 GPSM2P81274 684 aa27.95■■■□□ 2.06
EDEM1-205ENST00000465187 GPRC5DQ9NZD1 345 aa27.95■■■□□ 2.06
EDEM1-205ENST00000465187 SPEF2Q9C093 1822 aa27.95■■■□□ 2.06
EDEM1-205ENST00000465187 VEGFBP49765 207 aa27.94■■■□□ 2.06
EDEM1-205ENST00000465187 CCDC85AQ96PX6 553 aaPredicted RBP27.94■■■□□ 2.06
EDEM1-205ENST00000465187 VPS33BQ9H267 617 aa27.94■■■□□ 2.06
EDEM1-205ENST00000465187 POLLQ9UGP5 575 aa27.94■■■□□ 2.06
EDEM1-205ENST00000465187 WWC1Q8IX03 1113 aa27.93■■■□□ 2.06
EDEM1-205ENST00000465187 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
EDEM1-205ENST00000465187 NSFL1CQ9UNZ2 370 aaKnown RBP27.93■■■□□ 2.06
EDEM1-205ENST00000465187 SCN9AQ15858 1988 aa27.92■■■□□ 2.06
EDEM1-205ENST00000465187 RIMBP2O15034 1052 aa27.92■■■□□ 2.06
EDEM1-205ENST00000465187 CIAPIN1Q6FI81 312 aa27.92■■■□□ 2.06
EDEM1-205ENST00000465187 CCDC30Q5VVM6 783 aa27.91■■■□□ 2.06
EDEM1-205ENST00000465187 G2E3Q7L622 706 aa27.91■■■□□ 2.06
EDEM1-205ENST00000465187 METTL22Q9BUU2 404 aaPredicted RBP27.91■■■□□ 2.06
EDEM1-205ENST00000465187 DBNDD1Q9H9R9 158 aa27.91■■■□□ 2.06
EDEM1-205ENST00000465187 KCNQ5Q9NR82 932 aa27.91■■■□□ 2.06
EDEM1-205ENST00000465187 MAP3K2Q9Y2U5 619 aa27.91■■■□□ 2.06
EDEM1-205ENST00000465187 USP50Q70EL3 339 aaPredicted RBP27.9■■■□□ 2.06
EDEM1-205ENST00000465187 ZBTB12Q9Y330 459 aaPredicted RBP27.9■■■□□ 2.06
EDEM1-205ENST00000465187 IGKV5-2P06315 115 aa27.89■■■□□ 2.06
EDEM1-205ENST00000465187 HIRAP54198 1017 aaPredicted RBP27.89■■■□□ 2.06
EDEM1-205ENST00000465187 TMC4Q7Z404 712 aa27.89■■■□□ 2.06
EDEM1-205ENST00000465187 TRPM4Q8TD43 1214 aa27.89■■■□□ 2.06
EDEM1-205ENST00000465187 MRS2Q9HD23 443 aa27.89■■■□□ 2.06
EDEM1-205ENST00000465187 ADARB2Q9NS39 739 aaKnown RBP27.89■■■□□ 2.06
EDEM1-205ENST00000465187 SALL2Q9Y467 1007 aaPredicted RBP27.89■■■□□ 2.06
EDEM1-205ENST00000465187 C6orf229H3BNL8 230 aa27.88■■■□□ 2.05
EDEM1-205ENST00000465187 ANP32CO43423 234 aa27.88■■■□□ 2.05
EDEM1-205ENST00000465187 PCCAP05165 728 aaPredicted RBP27.88■■■□□ 2.05
EDEM1-205ENST00000465187 RPS8P62241 208 aaKnown RBP27.88■■■□□ 2.05
EDEM1-205ENST00000465187 CCDC191Q8NCU4 936 aa27.88■■■□□ 2.05
EDEM1-205ENST00000465187 MYH3P11055 1940 aa27.88■■■□□ 2.05
EDEM1-205ENST00000465187 FOXN1O15353 648 aa27.87■■■□□ 2.05
EDEM1-205ENST00000465187 DOK7Q18PE1 504 aa27.87■■■□□ 2.05
EDEM1-205ENST00000465187 CCDC27Q2M243 656 aa27.87■■■□□ 2.05
EDEM1-205ENST00000465187 WASHC4Q2M389 1173 aa27.87■■■□□ 2.05
EDEM1-205ENST00000465187 CST9Q5W186 159 aa27.87■■■□□ 2.05
EDEM1-205ENST00000465187 CWC25Q9NXE8 425 aaPredicted RBP27.87■■■□□ 2.05
EDEM1-205ENST00000465187 PI4KAP2A4QPH2 592 aa27.86■■■□□ 2.05
EDEM1-205ENST00000465187 RASSF10A6NK89 507 aa27.86■■■□□ 2.05
EDEM1-205ENST00000465187 PI4KAP1Q8N8J0 262 aa27.86■■■□□ 2.05
EDEM1-205ENST00000465187 TBC1D16Q8TBP0 767 aa27.86■■■□□ 2.05
EDEM1-205ENST00000465187 BCL2L13Q9BXK5 485 aa27.86■■■□□ 2.05
EDEM1-205ENST00000465187 ABT1Q9ULW3 272 aaKnown RBP27.86■■■□□ 2.05
EDEM1-205ENST00000465187 PSMD14O00487 310 aa27.85■■■□□ 2.05
EDEM1-205ENST00000465187 CWF19L2Q2TBE0 894 aaKnown RBP27.85■■■□□ 2.05
EDEM1-205ENST00000465187 TWISTNBQ3B726 338 aaPredicted RBP27.85■■■□□ 2.05
EDEM1-205ENST00000465187 RTL9Q8NET4 1388 aa27.85■■■□□ 2.05
EDEM1-205ENST00000465187 DEFB115Q30KQ5 88 aa27.84■■■□□ 2.05
EDEM1-205ENST00000465187 DLK2Q6UY11 383 aa27.84■■■□□ 2.05
EDEM1-205ENST00000465187 GLIS2Q9BZE0 524 aaPredicted RBP27.84■■■□□ 2.05
EDEM1-205ENST00000465187 WTIPA6NIX2 430 aaPredicted RBP27.83■■■□□ 2.05
EDEM1-205ENST00000465187 ECE2O60344 883 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 PDE8AO60658 829 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 EGFRP00533 1210 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 TNIP1Q15025 636 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 KSR2Q6VAB6 950 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 TNS4Q8IZW8 715 aa27.83■■■□□ 2.05
EDEM1-205ENST00000465187 CNOT7Q9UIV1 285 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms